Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01534 atgaagaaaagccCAGTCCCCAATTTGCTTCTTCAGTCGAGCCAAAGAAAACAGCATGCTAATCTCAAATACACTGCTGTTGCAGAGAATGATAATCTCAACAAGGCAAATTCTGCACTGAAATATCTCAAATCAGCTATCAAGAAATGTGCTTTCATTCCtgcaatttttgtttctgggaaaagaaaaccagCCCCAAAAATTGATGCGAGTAATGGCTTAAGGAGTCAATTTAAAGACAAAGGGGTTTCATCGTTTTCAACTGATGCATCCTCTGGAAGTACTATGACTAATAAAAGTTCATCAAGATGGAAGTTTTCTTCATCCTATGCATCTTCTAGCACTGCAAGTGGACAGCTTGGAGCTGGGAACTTctcttttgaagaaatttacaAGGCAACGGAGAAATTCTCTCCAAGTAATAAAATTGGGGAAGGTGGGTTTGGAACAGTCTATAAAGGAAGGCTTAATGATGGATCTCTTGTTGCCATAAAACGTGCCAAGAAGGAAGTGCAAGGCAAGAACTTGTCTGAGTTCAAGAATGAAGTATTAACCTTGTCAAAAATTGAGCATCTGAATCTTGTGAGATTATATGGATATTTGGAGCATGAAGATGAAAAGATGATTGTTGTTGAATATGTTGCTAATGGGACGCTGCGGGAACATTTAGATGGTATACGGGGAGATGAACTAGAAATGAGTGAGCGTCTAGACATAGCAATTGATGTTGCTCATGCAATTACCTACCTTCATATGTATGCAGATCGTTCGATAATTCATAGAGACATCAAAGCATCGAACATCTTAATTACAGAGAAATTTAGGGGCAAAGTTGCAGACTTTGGATTTGCGCGTTTGGCCGGAGAAGACCCTGATGCAACACATATTTCAACCCAAGTTAAAGGAACAGCTGGATACTTAGATCCTGAGTATCTGAGAACATATCAACTCACAGAAAAGAGTGATGTTTATTCCTTTGGTGTATTGCTTGCAGAGATGATGACAGGGAGACATCCTATAGAATCAAAGAAGGCCATCAATGAGAGGGTGACAATCAGATGGGCAATGCAGCTGCTAAAACAAGGAGATGCTGTGGTTGCCATGGATCCGCGGCTAGAAAGAACACCGGCCTCATCCATGTCTATGGAGAAGGTTCTCGAGCTAGCTCACCATTGTCTGGCACCTTTGAGGCAATCTAGGCCAACCATGAAGAGTTGTGCAGAGGTTCTATGGGGTATCAGGAAAGATTTTAGAGACAAGTTAGCCTCTTCTCATTCTCCTGTTACTTCTCaccattcttcaaattttcccCATAGAGATCCAAGAAAGAGTAGGCAGTCATTTGGTATTGAAGATGATGATAGCTATAAATTTGTCTCTGCATA 1385 0.3863 MKKSPVPNLLLQSSQRKQHANLKYTAVAENDNLNKANSALKYLKSAIKKCAFIPAIFVSGKRKPAPKIDASNGLRSQFKDKGVSSFSTDASSGSTMTNKSSSRWKFSSSYASSSTASGQLGAGNFSFEEIYKATEKFSPSNKIGEGGFGTVYKGRLNDGSLVAIKRAKKEVQGKNLSEFKNEVLTLSKIEHLNLVRLYGYLEHEDEKMIVVEYVANGTLREHLDGIRGDELEMSERLDIAIDVAHAITYLHMYADRSIIHRDIKASNILITEKFRGKVADFGFARLAGEDPDATHISTQVKGTAGYLDPEYLRTYQLTEKSDVYSFGVLLAEMMTGRHPIESKKAINERVTIRWAMQLLKQGDAVVAMDPRLERTPASSMSMEKVLELAHHCLAPLRQSRPTMKSCAEVLWGIRKDFRDKLASSHSPVTSHHSSNFPHRDPRKSRQSFGIEDDDSYKFVSA 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01534 461 ProSiteProfiles Protein kinase domain profile. 137 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g01534 461 MobiDBLite consensus disorder prediction 435 452 - -
Bva12g01534 461 SUPERFAMILY Protein kinase-like (PK-like) 115 413 IPR011009 -
Bva12g01534 461 PANTHER CALMODULIN-BINDING RECEPTOR-LIKE CYTOPLASMIC KINASE 1 25 440 - -
Bva12g01534 461 Gene3D Phosphorylase Kinase; domain 1 95 213 - -
Bva12g01534 461 ProSitePatterns Protein kinases ATP-binding region signature. 143 169 IPR017441 GO:0005524
Bva12g01534 461 Pfam Protein kinase domain 140 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g01534 461 ProSitePatterns Serine/Threonine protein kinases active-site signature. 258 270 IPR008271 GO:0004672|GO:0006468
Bva12g01534 461 Gene3D Transferase(Phosphotransferase) domain 1 214 434 - -
Bva12g01534 461 MobiDBLite consensus disorder prediction 422 461 - -
Bva12g01534 461 SMART serkin_6 137 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g01534 461 PANTHER RECEPTOR-LIKE PROTEIN 55 25 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01534 Bva-Chr12 13091771 13095501 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01534 125 413 Receptor kinase-like Gene Family AT1G30570 45.890 7.28e-71 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Bva12g01534 Pkinase 2.5e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01534 - - gmx:100811511 592.038