Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01532 ATGCAAGCCCATCATCACCATGGTAAACCTTCCTTCCCTCTCCCCGTGGACGGTGATCGGAAAGCCACCGAGTTCCGCCCACTTTCACTGGCACCACCCCATATGCGTGCCTTCCACCTTGCATGGCTCAaccttttctcttgttttttctcCACTTTCTCCATCCCTCCACTCGTTCCCATAATCCGGCGTGACCTGAATCTCACCGCCACAGATATCGGTAACGCCGGCATCGCCTCCTTCGCGGGCTCCATCTTCTCCCGCCTCTTGATGGGACCCACCTGTGACCTCGTGGGTCCCAGAATAGCGTCTGGCACACTCTCCCTCCTCACTGCTCCCGTCATCCTTGCTACCTCTCTTGTTTCCTCACCTCAAGCTTTCATTGCTGTTCGGTTCTTCGTGGGTTTCTCACTGGCTAATTTTGTGTCCAACCAGTTCTGGATGAGTTCTATGTTCTCCGGCAACGTCGTTGGCATAGCTAACGGCGTTGCTGCCGGATGGGCCAACGTGGGTTCCGGCGTGACTCAACTAGTCATGCCACTTGTTTACACTCTAATCATGTTCTTTAACGTGCAATCTTCGACTGCTTGGAGGCTTGCGTTTATAATTCCCGCAATCTTCCAAGTAGTCACAGGAATTTTGGTGTTGGCTTTCGGCCAAGACCTTCCTTCCGGTGGCTATATCCGTTACCGGAAtaacccaaaagaaaacaacaacaataacagCCTATTTAACGTTGTATTTCATGGGCTGTCCAATTACAGAGGTTGGATTCTGGGATTGCTATATGGGTTTTCTTTTGGGGTGGAACTAACTACAGATAACATTATAGCACAGTACTTTTATGATAGATTCAAGTTGAATGTTCAGACGGCGGGGACAATTGCGGCGTGTTTTGGAATGGCGAATTTGTTTTCACGACCGATGGGAGGGGTGATTTCTGATAAAATGGGAAAGAGGTTTGGAATGAGGGGAAGGCTGTGGGCCTTGTGGGTGGTCCAAACAGTGGCTGGATTGTTGTGTGTGCTGCTTGGACGAGTTAACACTCTGTGGGGTTCCATCCTTGTCGTGTGTACATTTTCTGTATTTGTTCAAGCTGCTTCTGGCCTCACCTTTGGTGTAGTTCCATTCGTCTCCAGAAGATCACTGGGAGTCATTTCAGGTATGACAGGAAGCGGAGGCACTATAGGAGCTGTGGTGACTCAAATGCTGTTGTTTTCAGGCTCTAACATGTCAAAGCAAAAAAGCATATCTCTTATGGGCCTTATGATGGTTGTTTGCACTCTTCCAGTAACCTTGATGTATTTCCCTCAATGGGGTGGTATGTTCTGTGGCCCTTCCTCAGATCACCATTTCTCTGACGAAAATTACAGTCTGCTAGAATA 1385 0.4744 MQAHHHHGKPSFPLPVDGDRKATEFRPLSLAPPHMRAFHLAWLNLFSCFFSTFSIPPLVPIIRRDLNLTATDIGNAGIASFAGSIFSRLLMGPTCDLVGPRIASGTLSLLTAPVILATSLVSSPQAFIAVRFFVGFSLANFVSNQFWMSSMFSGNVVGIANGVAAGWANVGSGVTQLVMPLVYTLIMFFNVQSSTAWRLAFIIPAIFQVVTGILVLAFGQDLPSGGYIRYRNNPKENNNNNSLFNVVFHGLSNYRGWILGLLYGFSFGVELTTDNIIAQYFYDRFKLNVQTAGTIAACFGMANLFSRPMGGVISDKMGKRFGMRGRLWALWVVQTVAGLLCVLLGRVNTLWGSILVVCTFSVFVQAASGLTFGVVPFVSRRSLGVISGMTGSGGTIGAVVTQMLLFSGSNMSKQKSISLMGLMMVVCTLPVTLMYFPQWGGMFCGPSSDHHFSDENYSLLE 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01532 461 Pfam Major Facilitator Superfamily 42 400 IPR011701 GO:0022857|GO:0055085
Bva12g01532 461 SUPERFAMILY MFS general substrate transporter 23 435 IPR036259 -
Bva12g01532 461 CDD MFS_NRT2_like 38 433 IPR044772 GO:0015112
Bva12g01532 461 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 6 457 IPR044772 GO:0015112
Bva12g01532 461 PANTHER HIGH AFFINITY NITRATE TRANSPORTER 2.7 6 457 - -
Bva12g01532 461 Gene3D MFS general substrate transporter like domains 243 441 IPR036259 -
Bva12g01532 461 Gene3D MFS general substrate transporter like domains 33 225 IPR036259 -
Bva12g01532 461 ProSiteProfiles Major facilitator superfamily (MFS) profile. 37 439 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01532 Bva-Chr12 13075183 13078312 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01532 1 460 Inorganic Solute Cotransporters AT5G14570 64.927 0.0 610
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01532 K02575 - jre:109021642 678.707