Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01512 ATGGCCGCCATTGCTACCTTCTTCCACaagtttttctctcttcttgtcCTTCTTGTTCACCTTGGCTGCTTCATTTTCACCACCACTTGCGGCGCCGCCGGTGACGGAGAACGAGGAGAAGATCAGCATCCAGGCAAAAGAGTGTCAAAGAAACGGAAAGTGTCCCCTGTGTCGGCTCAGCAGTCCCATTCTTCTCATCCCAAGTTTAAGACCCATAAggctatttcttcttcttggacTTTTATCAAACACCTTTTCCGCAGTAAGTCCTGCAAAACAATCACGACTTCCCCGATATCACCACCTCACGCTCAATCCACCGCTACAACTTTGTTGACTTCTGCTAGGACTTCTCAGCAATCATTGGTGTCCCTCGCTCAACCCGAATCGCACTTTCCGGATCCTCCACGTAAAATACCATCCGGGTCTTGCTCAGAATCCGAAATCTCCGCCGATAACAACCACTTCTTCCCCCTCCGGAACGATATCTTCCCCTGCACCGCTTGCGGTGAGATTTTCCAGAAACCCCAGATTCTCGAACAGCATCAGGCGATTAAACACGCTGTTTCGGAGCTCACAGAAACCGATGCGGGTCACAACATAGTCCGAATCATATTTAAGTCGGGTTGGACAAACACCCAGAAGTGCCCCAAGATAACCCGGATTCTAAAGATCCATAACAGCCCGAAAATTCTCTCCAAGTTCGAAGAGTACAGGGAATCAGTGAAAGCCAAGGCTGCTCGAAACGGCGCCGTAAAGAAACGAGACGAAAGGTGCATCGCCGATGGCAACGAGCTCATGCGGTTTCACTGCTCCACTTTTCTCTGCGATTTGGGACTCAATGGGGATTCCGGCATTTGTGTCCAGCAATACTGTAGCATATGCGGGATCATAAAATCTGGATTCTCACCCAAGTTGGACGGAATTTCCACGCTATCGACGAGCTGGAGAGCACACGTGGCAATACCGGAGGACATCGAGGAGGAGTTCAAGTTCATGAACGTGAAGCGGGCGATGCTGGTCTGTCGGGTCATCTCAGGTCGGATCGGGTGTGACTCCGACGAGGTAGATAAAGAAGACGGGGGTTATGATTCGGTGTTGGCGCGTGGAGCAAGTGGTGTTTATACCCGTTTGGATGAAGAGGAGCTACTGGTGTTTAATCCAAGGGCTGTGCTTCCTTGCTTTGTGATTGTGTATACTGTGTG 1205 0.4888 MAAIATFFHKFFSLLVLLVHLGCFIFTTTCGAAGDGERGEDQHPGKRVSKKRKVSPVSAQQSHSSHPKFKTHKAISSSWTFIKHLFRSKSCKTITTSPISPPHAQSTATTLLTSARTSQQSLVSLAQPESHFPDPPRKIPSGSCSESEISADNNHFFPLRNDIFPCTACGEIFQKPQILEQHQAIKHAVSELTETDAGHNIVRIIFKSGWTNTQKCPKITRILKIHNSPKILSKFEEYRESVKAKAARNGAVKKRDERCIADGNELMRFHCSTFLCDLGLNGDSGICVQQYCSICGIIKSGFSPKLDGISTLSTSWRAHVAIPEDIEEEFKFMNVKRAMLVCRVISGRIGCDSDEVDKEDGGYDSVLARGASGVYTRLDEEELLVFNPRAVLPCFVIVYTV 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01512 401 ProSitePatterns Zinc finger C2H2 type domain signature. 166 187 IPR013087 -
Bva12g01512 401 MobiDBLite consensus disorder prediction 54 70 - -
Bva12g01512 401 Gene3D - 187 400 - -
Bva12g01512 401 SUPERFAMILY ADP-ribosylation 189 400 - -
Bva12g01512 401 MobiDBLite consensus disorder prediction 35 70 - -
Bva12g01512 401 PANTHER NUCLEIC ACID BINDING PROTEIN 3 400 - -
Bva12g01512 401 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 3 400 - -
Bva12g01512 401 MobiDBLite consensus disorder prediction 126 146 - -
Bva12g01512 401 ProSiteProfiles Zinc finger C2H2 type domain profile. 164 192 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01512 Bva-Chr12 12923011 12924639 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01512 79 401 C2H2 Transcription Factor Family AT2G29660 58.084 4.24e-117 344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01512 - - qlo:115989317 564.303