Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01508 ATGGCCGTTCGATCTGTTGGGGAAGAAGAGAAATCCACTCCTCAGAAGCGCAAATTGAGATCTTCATCCAATGTATCATCTGTGAAGCAAAGTCCGGCCGCTTCTCCTAGCAAGTGGAAATCACCTCGCCGATGCATCAGCACTAGCCCCAATGCCGCTACCACTGAAAACGAGACACGTATCCATAAACATCAACCTGAATTGCTTAATCCAGTAGCAAAGCCATTATTGGACTGTTTTACTCCCAAACCAAAATGGGATCCCAAAGATGGCGAACAAATAAGGATGGTGAAGGAAGCATTGCATGTGTCATCGGCACCATCTACAATCGTGTGCCGTGAAGACGAGAAGAATGTAATTTTGGAATTCTGCAAGTCATGCATAGAGCAAGAAAAGGCTGGCAGTTTATACATATGTGGATGTCCGGGAACCGGAAAATCTTTGTCAATGGAGAAAGTGAAGGTGCTTTTAGCCAATTGGGCTAGAGAGTCTGGTTTTCTGCAGCCGAATGTGTTAGCTGTAAACTGTACTTCCCTTGCCAATACATCGGATATTTTCAGCAAGATACTTGGGTTGAACCAACCACAGAGAAAAAATGTTACAATAACACCCTTACAACAGCTTCAGAACATGTATTCTCAAAAGTCATCTAGCAAGAACATGATATTGGTAGTAGCTGATGAATTAGATTATCTAATTACCAAAGACAAGGCTGTGCTTCACAATCTCTTTATGCTCACCACCTTCCCATTTTCCAGATGTATATTAATAGGAATAGCAAATGCAATTGATCTAGCTGATCGCTTTCTTCCAAGGCTTAAAGCATTAAATTGCAAGCCTATGGTTGTGACTTTTCGGGCCTATTCCACAGATCAGATTCTCAGGATTCTTCAAGAAAGGCTAAGGGAACTTCCTTACACTGTCTTCCAACATCAAGCACTGGAGCTATGTGCTAGAAAAGTCGCTGCAGCTTCTGGAGATATGCGTAAAGTCCTTTCTATTTGCAGgAGTGCAATTGATATGCTAGAAGCAGAAACTAGAGAATCTACCAGCATTTCAGATATTGCATCAGAAGAGGAACTATCCCCCGAGCAAAATGTAGCCAGCACTCCTGATTACACGAAAAAGCATGAAGTTGACATTGTAAGGATTGATCATATGACTCGTGCCTTGTCAAAGACATACAGATCACCTCTAGTGGATACAATACAATCTCTACCTCATCATCAACAGATTATTCTTTGCTCTTCTATGAAACATTTCCGCGGAGTAAAAAAAGATACAATTCTAGGGGAGCTGTATAAATCTTACATGGATATATGCAAATCATCGCTGATCCCACCAGCTggaattttggaattttcaaaCATGTGCAGGGTGCTAAACGACCAGGGGCTTGTAAAACTAGGACAATCACGAGAGGATAAATTGAGAAAGGTAGCATTAAAAGTTGATGAAGCTGATATTACTTTTGCATTGCAGGGCATCCGATTTTTTCGAAACTATCTTCAATA 1514 0.4089 MAVRSVGEEEKSTPQKRKLRSSSNVSSVKQSPAASPSKWKSPRRCISTSPNAATTENETRIHKHQPELLNPVAKPLLDCFTPKPKWDPKDGEQIRMVKEALHVSSAPSTIVCREDEKNVILEFCKSCIEQEKAGSLYICGCPGTGKSLSMEKVKVLLANWARESGFLQPNVLAVNCTSLANTSDIFSKILGLNQPQRKNVTITPLQQLQNMYSQKSSSKNMILVVADELDYLITKDKAVLHNLFMLTTFPFSRCILIGIANAIDLADRFLPRLKALNCKPMVVTFRAYSTDQILRILQERLRELPYTVFQHQALELCARKVAAASGDMRKVLSICRSAIDMLEAETRESTSISDIASEEELSPEQNVASTPDYTKKHEVDIVRIDHMTRALSKTYRSPLVDTIQSLPHHQQIILCSSMKHFRGVKKDTILGELYKSYMDICKSSLIPPAGILEFSNMCRVLNDQGLVKLGQSREDKLRKVALKVDEADITFALQGIRFFRNYLQ 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01508 504 Pfam AAA domain 131 248 IPR003593 -
Bva12g01508 504 Coils Coil 502 504 - -
Bva12g01508 504 MobiDBLite consensus disorder prediction 1 67 - -
Bva12g01508 504 Gene3D - 90 276 IPR027417 -
Bva12g01508 504 Pfam CDC6, C terminal winged helix domain 414 492 IPR015163 -
Bva12g01508 504 Gene3D - 403 493 IPR036388 -
Bva12g01508 504 PIRSF Cdc6 1 504 IPR016314 GO:0006270|GO:0051301
Bva12g01508 504 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 100 355 IPR027417 -
Bva12g01508 504 SUPERFAMILY "Winged helix" DNA-binding domain 399 501 IPR036390 -
Bva12g01508 504 PANTHER CELL DIVISION CONTROL PROTEIN 6 HOMOLOG 3 503 - -
Bva12g01508 504 SMART Cdc6_C_2 414 493 IPR015163 -
Bva12g01508 504 MobiDBLite consensus disorder prediction 18 56 - -
Bva12g01508 504 CDD AAA 111 277 - -
Bva12g01508 504 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 3 503 - -
Bva12g01508 504 CDD Cdc6_C 407 489 IPR015163 -
Bva12g01508 504 Gene3D - 277 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01508 Bva-Chr12 12877492 12882797 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01508 2 503 Core DNA Replication Machinery Family AT2G29680 58.039 0.0 581
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01508 K02213 - gmx:100791200 668.307