Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01499 ATGGCGGTCTCATGGGAAGAAAGTGTCACAGCTTCCATCAACACAATATACCTTCTCTTTTCGGCGTATCTCGTCTTCGTAATGCAGATTGGCTTTGCCATGTTATGTGCAGGCTCAGTTCGTGCCAAGAACGCCATGAACATAATGCTCACCAATGTTGTTGATGCTGTTGCAGGCAGCATCTCCTTCTACCTCTTCGGCTTTGCATTTGCCTATGGTGATACCAACCCTTTCATTGGCACAGACTTCTTTGCTCTATTCGCCATTCCAAACGGTACTTATGACTATGGTTTCTTTCTGTTCCAATGGGCTTTTGCCATTGCAGTAGCTGGCATCACTAGTGGGTCTATAGCAGAAAGAACCCAGTTTAGTGCTTAtcttgttttctcatttttcatagGTGGGTTTGTTTATCCTGTTGTTGTTcattgggtttggtcatcgtCTGGTTGGCTTAGTCCAAGTTCAAGTGATTTGTTGCTTGGGTCAGGTGCCATTGACTTTGCTGGGAGTGGAGTGGTGCATTTGGTTGGGGCCATTGCTGGGTTTTGGGGTTCCCTCATCGAAGGCCCACGGGTTGGCCGGTTCGATGCTTTTGGGAAGCCCGTTCCTCTCCGAGGCCACAATGCAACCCTAGTGGTACTTGGGACATTCTTGTTGTGGTTTGGTTGGTTCGGTTTTAATCCTGGGTCATTTGACAAGATTCTTGTGGCATACCCTAGCACGACCCATCAAGGTAATTGGACTTCAGTGGGCCGAACTGCGGTCACAACGACATTAGCCGGTTCGACAGCCGCGATCATCACCTTGTTTGGAAGGCGATTGTTAGTAGGTCACTGGGATGCATTAGATGCTTGCAATGGCTTGCTTGGTGGGTTTGTTGCCATTACATCTGGTTGTGCAGTTGTTGAACCATGGGCTGCCATTGTATGTGGGTTTGTCTCGGCTTTTGTCTTAATTGGGCTTAATATTTTGGCCCTAAAACTACACTACGATGACCCATTAGAGGCAGCCCAATTGCATGGTGGGTGTGGCACTTGGGGTTTAATATTCACTGGTTTGTTTGCAAAGGAAGAGTTTGTGGTTCAAGCCTATGACTCAGGTGTGAAGGGTGTGACACGTCCCTATGGTCTTTTACTCGGAGGTGGATGGGGATTACTTGGAGCACAAGTTATTGAGATTTTGGTAATTGTTGTTTGGGTTAGTGTGACAATGGGACCTCTATTCTATGGTTTGCACAAACTTGACATGCTCAGAATTTCTACAAATGAAGAAGTTGCAGGCCTTGATATCTCAAGCCATGGAGGTTATGCCTATGCTCCTCAAGATGATGATTATCCTCGCTCTTATGGAGATTTTATGCGCTTGCGAATCGATCAAGCATG 1385 0.4542 MAVSWEESVTASINTIYLLFSAYLVFVMQIGFAMLCAGSVRAKNAMNIMLTNVVDAVAGSISFYLFGFAFAYGDTNPFIGTDFFALFAIPNGTYDYGFFLFQWAFAIAVAGITSGSIAERTQFSAYLVFSFFIGGFVYPVVVHWVWSSSGWLSPSSSDLLLGSGAIDFAGSGVVHLVGAIAGFWGSLIEGPRVGRFDAFGKPVPLRGHNATLVVLGTFLLWFGWFGFNPGSFDKILVAYPSTTHQGNWTSVGRTAVTTTLAGSTAAIITLFGRRLLVGHWDALDACNGLLGGFVAITSGCAVVEPWAAIVCGFVSAFVLIGLNILALKLHYDDPLEAAQLHGGCGTWGLIFTGLFAKEEFVVQAYDSGVKGVTRPYGLLLGGGWGLLGAQVIEILVIVVWVSVTMGPLFYGLHKLDMLRISTNEEVAGLDISSHGGYAYAPQDDDYPRSYGDFMRLRIDQA 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01499 461 PANTHER AMMONIUM TRANSPORTER 1 MEMBER 3 1 457 - -
Bva12g01499 461 TIGRFAM amt: ammonium transporter 14 439 IPR001905 GO:0008519|GO:0016020|GO:0072488
Bva12g01499 461 Pfam Ammonium Transporter Family 18 439 IPR024041 GO:0008519|GO:0016020|GO:0072488
Bva12g01499 461 SUPERFAMILY Ammonium transporter 12 420 - -
Bva12g01499 461 ProSitePatterns Ammonium transporters signature. 167 192 IPR018047 GO:0008519|GO:0016020|GO:0072488
Bva12g01499 461 Gene3D Ammonium transporter AmtB like domains 2 451 IPR029020 -
Bva12g01499 461 PANTHER AMMONIUM TRANSPORTER 1 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01499 Bva-Chr12 12810838 12812223 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01499 7 445 Inorganic Solute Cotransporters AT1G64780 68.386 0.0 604
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01499 K03320 - jre:109009016 745.347