Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01490 ATGGAGTCCCATCAAGGGGAAATCAATGATTTGGAGAATAATAGTCACCACCACCACAGTGACAAAAACGGCGTCGTCAGAGGGTTCCGGTCGACGCCGCAGAACTTGTCGGCTTCAATGGTGAGAAAGAAATCAGACCCAGTTCTGGTGACCACTGACATTCGTTTCCAAATGCTTAGAAATTTCATAACCAATTTACAAGAAGTCATCTTTGGCACTAAGCTTGCTGTGCTTTTTCCGGCCATCCCTTTAGCTGTTGCTGCAGATTTTTATAGCTTCGGAAGGCCTTGGATTTTTGCTTTGAGCTTACTTGGACTCACCCCCTTAGCTGAACGTGTTAGCTTTCTCACTGAACAAATTGCGTATTACACTGGTCCAACAGTTGGAGGGCTTCTGAATGCAACCTGTGGTAATGCAACTGAGATGATCATAGCAATATTAGCACTTCACAAGAACAAAATACATGTTGTGAAGTTCTCCCTTTTGGGTTCCATTCTATCAAACCTTCTACTAGTTCTTGGCACTTCTCTTCTCTGTGGAGGCTTAGCCAATCTCAGAAAGGAACAAAAATATGACAGAAAACAAGCAGATGTGAACTCACTGCTTCTGCTGCTGGGTTTGCTGTGCCATTTGCTGCCATTACTGTTCAAATATGCCTTAGAAGGGAGCACGTATCCTATAGATATCTATACTCTCCAATTGTCAAGAGCAAGCAGCATTGTTATGCTTCTAGCTTATGTTGCATATATCTTCTTCCAATTGAAAACTCATCGGCAATTGTTTGATTCACAAGAGGAGGACGAAGCTGAAGAGAAGCCAGTGATAGGGTTTCGGAGTGCATTCACATGGCTTGTGGGTATGACATTGATCATATCCCTTCTATCAGAATATGTTGTGGCCACCATTGAGGCTGCATCAGATTCTTGGGGCATTTCTGTTAGCTTCATCAGCATAATTTTGCTACCAATTGTGGGGAATGCTGCAGAGCATGCTGGCTCAATAATATTTGCTTATAAGAACAAGTTGGATATCTCTCTTGGTGTTGCTATGGGATCTGCAACTCAAATTTCAATGTTTGTTGTTCCACTGAGTGTGTTGGTTGCATGGATAATGGGAATCCAAATGGATTTAGATTTCAGTCTCCTTGAAACTGGGTCTCTTGCTTTTACAATAATTGTTACAGCATTCACTTTGCAggATGGAACTTCACACTATATGAAAGGAGTGGTCCTTTCTCTGTGTTATATAGTAATTTCTGCatgcttttttgtttacagAACTCCTTTTATCGACCAAAATGGTGTGGTAAATTTGGGGGGTAAACCATCTTTTGGTGCTTTGGCAACTTG 1349 0.4129 MESHQGEINDLENNSHHHHSDKNGVVRGFRSTPQNLSASMVRKKSDPVLVTTDIRFQMLRNFITNLQEVIFGTKLAVLFPAIPLAVAADFYSFGRPWIFALSLLGLTPLAERVSFLTEQIAYYTGPTVGGLLNATCGNATEMIIAILALHKNKIHVVKFSLLGSILSNLLLVLGTSLLCGGLANLRKEQKYDRKQADVNSLLLLLGLLCHLLPLLFKYALEGSTYPIDIYTLQLSRASSIVMLLAYVAYIFFQLKTHRQLFDSQEEDEAEEKPVIGFRSAFTWLVGMTLIISLLSEYVVATIEAASDSWGISVSFISIILLPIVGNAAEHAGSIIFAYKNKLDISLGVAMGSATQISMFVVPLSVLVAWIMGIQMDLDFSLLETGSLAFTIIVTAFTLQDGTSHYMKGVVLSLCYIVISACFFVYRTPFIDQNGVVNLGGKPSFGALAT 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01490 449 TIGRFAM caca2: calcium/proton exchanger 61 423 - -
Bva12g01490 449 MobiDBLite consensus disorder prediction 1 25 - -
Bva12g01490 449 TIGRFAM cax: calcium/proton exchanger 80 423 IPR004798 GO:0006816|GO:0015369
Bva12g01490 449 MobiDBLite consensus disorder prediction 1 26 - -
Bva12g01490 449 Pfam Sodium/calcium exchanger protein 97 254 IPR004837 GO:0016021|GO:0055085
Bva12g01490 449 Pfam Sodium/calcium exchanger protein 280 420 IPR004837 GO:0016021|GO:0055085
Bva12g01490 449 Gene3D - 126 266 IPR044880 -
Bva12g01490 449 Gene3D - 273 424 IPR044880 -
Bva12g01490 449 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 7 434 IPR004713 GO:0006812|GO:0008324|GO:0016021
Bva12g01490 449 PANTHER VACUOLAR CATION/PROTON EXCHANGER 7 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01490 Bva-Chr12 12743548 12748732 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01490 23 428 Antiporters AT2G38170 67.548 0.0 532
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01490 K07300 - gmx:100816844 635.18