Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01462 ATGAAGCTTCAGTCCTCTATTGCTGCATTTGTTTTCCTAAGTTTCATACTGTCTCACTGTGGCTTAATTGTAGCTGACCTGAACTCTGACAGGCAGGCACTCCTTGAGTTTTCTTCTAATGTCCCACATGCCAGAAAACTCAACTGGAATATTTCTACCCCAGTTTGTTCCTCCTGGGTTGGTGTGACTTGCAACTCTAATGGAACGCGTGTCGTTGCTATCCATCTTCCAGGAGTTGGATTTGCAGGTTCCATTCCAGAAAACAGCATAGGAAAACTAGATGCTCTTAGGATCTTGAGCCTTCATTCCAATGGCCTTAGTGGAAATCTTCCTTCTGATATCCTTTCCGTTCCCTCCCTCCAATGTGTATTCCTCCAGCATAATAACTTCTCAGGTCTAATTCCTTCCTCTGTTTCCCCTAAACTCGTTTCTTTGGATATTTCCTTCAACTCCTTCTCTGGCAGTATCCCACCTGCATTTCAGAATCTTAGGAGACTCACCTGGTTGTACCTCCAACACAATTCCATCTCTGGAGCTATCCCTGACCTCAACCTCCCGAGACTgaagtttttgaatttgagCTATAACAACTTGAATGGATCAATTCCAAGTTCCATCCAAAAATTCTCTTATGATTCTTTTGTTGGGAACTCCCTCTTATGTGGGCCACCTCTTAATCATTGTTCTCCAGTCAccccttctccttctccttcccCTGTTCATGAGCCACACTCCCCAGCAAACACCCATAATCAAAAGGCCACCACTTCTAAGAAAAGCTTTAGCCTAGCTTCTATACTTGCTCTAGTAATTGGGGGCTGTGCATTCCTCTCTCTCCTTGTTTTAGTGACTACTATATGCTGTTACAAGAGGAAAAACAGTCAAAGCAGTGACGTGCTCAAAGGAAAGGCATCAGCTTGTGCTGGAAAGCCTGCCGTGAATTCAAAGGATTTTGGGAGTGGGGTGCAAGATGCTGAGAGGAAcaagttgtttttctttgaaggTTGCTCTTACAGCTTTGACCTTGAGGATTTGTTAAAGGCTTCTGCAGAAGTTCTTGGTAAGGGGAGCTATGGAACAGCTTATAAGGCTGTTTTGGAAGAGGGAACAACAGTGGTAGTTAAAAGGTTGAGGGAAGTTGTGGCTGGAAAGAGAGAGTTTGAGCAGCAGATGGAGATTGTGGGAAAATTTGGACGCCACCCTAATGTCATGCCCCTTCGAGCTTTTTACTATTCCAAAGATGAAAAGCTCTTAGTTTATGACTACATGCCTGGGGGAAGCTTGTTTGCCTTGTTGCATGGGAACAGGGATGCAGGAAGAACTCCGTTAGACTGGGATTCAAGAATGAAGATTTTACTTGGAACAGCCAAAGGAATTGCTTTCATCCACTCAGAGGGAGGCCCAAAATTTATTCATGGCAACATCAAATCTTCCAATGTTCTCATCACCCAAGACCTTGACGGTTGCATCACCGATGTTGGATTAGCTCCTATGATGAATCAACCAGCAACCATGTCTAGAGCAAATGGCTACCGTGCTCCGGAAGTAACTGATTCCCGGAAGATCACCCACAAGTCTGATGTTTACAGCTTTGGTGTGCTGCTCCTTGAAATGCTGACAGGGAAAATCCCACTGAGATATCCAGGGTACGATGATGTTGTTGATCTACCAAGGTGGGTCAGGTCAGTTGTTCGTGAGGAATGGACAGCTGAAGTTTTTGATGAAGAGCTATTGAGAGGCCAGTATGTCGAAGAGGAAATGGTGCAAATGCTTCAGATTGCACTGGCTTGTGTGGCAAAGACGCCTGATATGAGACCCAAAATAGATGAAGCTGTTCGAATGATAGAGGAAATCAGGAACCCTGAGTTGAAGAATAGGCCATCTTCTGAGTCTGAGTCTAACGTGCAGACACCATG 1916 0.4342 MKLQSSIAAFVFLSFILSHCGLIVADLNSDRQALLEFSSNVPHARKLNWNISTPVCSSWVGVTCNSNGTRVVAIHLPGVGFAGSIPENSIGKLDALRILSLHSNGLSGNLPSDILSVPSLQCVFLQHNNFSGLIPSSVSPKLVSLDISFNSFSGSIPPAFQNLRRLTWLYLQHNSISGAIPDLNLPRLKFLNLSYNNLNGSIPSSIQKFSYDSFVGNSLLCGPPLNHCSPVTPSPSPSPVHEPHSPANTHNQKATTSKKSFSLASILALVIGGCAFLSLLVLVTTICCYKRKNSQSSDVLKGKASACAGKPAVNSKDFGSGVQDAERNKLFFFEGCSYSFDLEDLLKASAEVLGKGSYGTAYKAVLEEGTTVVVKRLREVVAGKREFEQQMEIVGKFGRHPNVMPLRAFYYSKDEKLLVYDYMPGGSLFALLHGNRDAGRTPLDWDSRMKILLGTAKGIAFIHSEGGPKFIHGNIKSSNVLITQDLDGCITDVGLAPMMNQPATMSRANGYRAPEVTDSRKITHKSDVYSFGVLLLEMLTGKIPLRYPGYDDVVDLPRWVRSVVREEWTAEVFDEELLRGQYVEEEMVQMLQIALACVAKTPDMRPKIDEAVRMIEEIRNPELKNRPSSESESNVQTP 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01462 638 Pfam Leucine rich repeat N-terminal domain 28 65 IPR013210 -
Bva12g01462 638 Gene3D Ribonuclease Inhibitor 184 229 IPR032675 -
Bva12g01462 638 PANTHER RECEPTOR-LIKE KINASE 4 637 - -
Bva12g01462 638 Pfam Protein kinase domain 351 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g01462 638 Gene3D Ribonuclease Inhibitor 27 183 IPR032675 -
Bva12g01462 638 Gene3D Transferase(Phosphotransferase) domain 1 423 636 - -
Bva12g01462 638 Pfam Leucine Rich Repeat 187 209 IPR001611 GO:0005515
Bva12g01462 638 Pfam Leucine rich repeat 118 176 IPR001611 GO:0005515
Bva12g01462 638 PANTHER OS05G0588300 PROTEIN 4 637 - -
Bva12g01462 638 CDD STKc_IRAK 353 618 - -
Bva12g01462 638 MobiDBLite consensus disorder prediction 619 638 - -
Bva12g01462 638 ProSitePatterns Protein kinases ATP-binding region signature. 353 384 IPR017441 GO:0005524
Bva12g01462 638 Gene3D Phosphorylase Kinase; domain 1 314 422 - -
Bva12g01462 638 SUPERFAMILY Protein kinase-like (PK-like) 351 616 IPR011009 -
Bva12g01462 638 SUPERFAMILY L domain-like 40 226 - -
Bva12g01462 638 ProSiteProfiles Protein kinase domain profile. 347 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g01462 638 MobiDBLite consensus disorder prediction 231 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01462 Bva-Chr12 12588815 12592851 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01462 3 636 Receptor kinase-like Gene Family AT5G58300 58.970 0.0 747
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Bva12g01462 Pkinase 2.3e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01462 - - aprc:113868460 999.193