Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01460 ATGATTTACCCTCAATTATCTACCTTAAATGAGAATTGTTTGCAGAAGCCTTACCTGAATCACCTTATTCTTCCTAGTGGGCCACCTGATATTTTGCGTTCCAATTGTGTTGAGTTCGACTTTTCTGATGTGTTTGGACCACCTCCTGTTCAAGCCTCTGTAGAACTCAGTTCTGAGAAACTTGGAAATTTTGTAGCTGCACCAGAAGTCTGTattgagacaaagaaagaacttAAGGAACATTCTATTGATGATGTTTCTATAAATAAGTGCAATTTACAATTGAATCATTTCTGTTTGGAACATCAGCGTATTGGACTTGAGGATTTTGAGGTTTTGAAGCTTGTTGGGCAAGGTGCTTTTGGTAAGGTGTACCAGGTAAGGAGGAATGGTACTTCAGAGATATATGCAATGAAGGTCATGCGCAAGGATAAGATCATGCAGAGAAATCATGCTGAATATGTGAAATCTGAGAGGGACATTTTGACAAGAATGGATCACCCTTTTATTGTGCGGCTCAGATATTCATTCCaaACCAAATATAGGTTGTACCTGGTACTTGATTTCGTCAATGGTGGTCACCTTTTCTTTCAGCTCTATCGCCAAGGTCTATTCAGGGAGGATTTGGCGCGCTTCTATGCTGCGGAGATTGTTTGTGCTGTTTCTCATCTTCATGCAAATGGTATAATGCACAGGGATCTTAAACCTGAAAACATTCTTCTTGATGCAGATGGCCATGTACAGTTGACTGACTTTGGCATGGCTAAGCAATTCGATGAGACTACAAGGTCAAATTCAATGTGTGGAACTTTAGAATATATGGCCCCCGAAATTGTTATCGGGAAAGCCCATGATAAGGCAGCAGATTGGTGGAGTGTGGGAATTCTACTATACGAAATGCTTACGGGGAAGCCTCCTTTTTCCGGGGGAAATAGACAAAAGATCCAGCAGAAGATAGTAAAAGACAAGATCAAGCTTCCAGCGTTTTTGTCAAGTGCGGCACATTCATTGTTAAAAGGGCTGTTGCAGAAAGAAGCGAGTAAACGCATTGGCAGTGGACCAACTGGGAGTGAGGAGATAAAAATCCACAAGTGGTTTAAGTCATTAAATTGGAAGAAATTGGAAGCTCGTGAAATCAGGCCAAGCTTTGTTCCAGAAGTTGCTGGGAAGCACTGTGTTGCTAACTTTGACGACCGCTGGACTAACATGCCTCTGTTGGACTCTCCAGCAGCTAGTCCCAAATTCAACGACAACCCCTTCGGGGGGTTCTTCTATGTCAGTCCACCTTCATTTGAgagaaatgaacaaaaagCTTCATTTACAGAAGCCCTGTCTTGTAATTTGCATGATGGTTG 1355 0.4111 MIYPQLSTLNENCLQKPYLNHLILPSGPPDILRSNCVEFDFSDVFGPPPVQASVELSSEKLGNFVAAPEVCIETKKELKEHSIDDVSINKCNLQLNHFCLEHQRIGLEDFEVLKLVGQGAFGKVYQVRRNGTSEIYAMKVMRKDKIMQRNHAEYVKSERDILTRMDHPFIVRLRYSFQTKYRLYLVLDFVNGGHLFFQLYRQGLFREDLARFYAAEIVCAVSHLHANGIMHRDLKPENILLDADGHVQLTDFGMAKQFDETTRSNSMCGTLEYMAPEIVIGKAHDKAADWWSVGILLYEMLTGKPPFSGGNRQKIQQKIVKDKIKLPAFLSSAAHSLLKGLLQKEASKRIGSGPTGSEEIKIHKWFKSLNWKKLEAREIRPSFVPEVAGKHCVANFDDRWTNMPLLDSPAASPKFNDNPFGGFFYVSPPSFERNEQKASFTEALSCNLHDG 451
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01460 451 Pfam Protein kinase domain 110 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g01460 451 PANTHER RIBOSOMAL PROTEIN S6 KINASE 69 436 - -
Bva12g01460 451 PANTHER RIBOSOMAL PROTEIN S6 KINASE 1 66 - -
Bva12g01460 451 Gene3D Phosphorylase Kinase; domain 1 107 407 - -
Bva12g01460 451 PANTHER SERINE/THREONINE-PROTEIN KINASE ATPK2/ATPK19 69 436 - -
Bva12g01460 451 PANTHER SERINE/THREONINE-PROTEIN KINASE ATPK2/ATPK19 1 66 - -
Bva12g01460 451 ProSitePatterns Serine/Threonine protein kinases active-site signature. 229 241 IPR008271 GO:0004672|GO:0006468
Bva12g01460 451 SMART pkinase_C_6 367 427 IPR000961 GO:0004674|GO:0005524|GO:0006468
Bva12g01460 451 Gene3D Transferase(Phosphotransferase) domain 1 190 385 - -
Bva12g01460 451 ProSitePatterns Protein kinases ATP-binding region signature. 116 139 IPR017441 GO:0005524
Bva12g01460 451 SMART serkin_6 110 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g01460 451 SUPERFAMILY Protein kinase-like (PK-like) 107 430 IPR011009 -
Bva12g01460 451 ProSiteProfiles AGC-kinase C-terminal domain profile. 367 435 IPR000961 GO:0004674|GO:0005524|GO:0006468
Bva12g01460 451 ProSiteProfiles Protein kinase domain profile. 110 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g01460 451 CDD STKc_AGC 116 366 IPR045270 GO:0004674|GO:0005524
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Bva12g01460 Bva-Chr12 12582643 12584979 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01460 1 429 AGC Kinase Gene Family AT3G08720 61.588 0.0 564
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Bva12g01460 Pkinase 2.4e-76 CL0016
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01460 K04688 - tcc:18587513 649.818