Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01452 ATGCTCAGAACTAGCAGGACACCATTGCTGACCCTGAGGATGCTATCATCATCACCGTCGTCTCCCGCTGCTTTTGAAACTAGACTACCCTCTACTCTCAGAACCTTCGATAGGAATTCCAAATCTTCTTTCCGTCACCTTCCTCTATTCTCCAATTCTGAAAAGAGTTCCCAAACCATGACGCTTTCCAGATGCTTTTCCGGGGTTAGTGACCCCATTCCCATATCGGTGAATCCTGAAATGAGAAGTTCAGAACTGGAATCCGGCGACCCTCAATCTCTTGTGGTGGTCTCCTTCTACAAGTTCGCCGATTTTCCTGACCATGCTCATATGCGGAAACCCTTGAAGGAACTCTGTGAAGATCTGCGTGTCTCAGGCGGTATTATTCTCGCACCTGAAGGAATCAATGGCAGCTTATGTGGAATCCGGGAGTCTGTGGAAaaagttctttctttcataCAAAGTGATAACCGCCTAAAGGGTCTAAGACAAGTGGAATCACCTGTAAGCCCTGAGGAAGAAGCCATCCATCATGGACATAGTACTAGTTCTCCTCTTGCTGCAGGGGAAGATGCGCCCTTTCGATGGGATCACGTGAGAGTCAAGTTGAAGAAAGAGATTGTTACACTTGGGATGCCCAATGTATCCCCTAATGAAAGAGTCGGACAGTATGTTAGCCCGAAAGATTGGAATGCTTTGATTAGTGATCCAGATACAGTGGTGATTGATGTGCGCAATAACTATGAAACCAGAATAGGGAAGTTTAAAGGAGCAGCTGATCCATTTACAACATCATTTCGTGAATTCCCATCTTGGGTGGATGATCGTTTCCAACTGAAGAAAACAGACAGCAAGCATCCAACTGTTGAGGTGGGCAATTCAGGTCCAAGTGCTGACAAAGAAACAGATAATCTGAAGCAAAATATGCCCCGTGTTGCAATGTACTGCACTGGAGGTATCCGATGTGAGAAAGCTACAAGTTTGCTCCTCAGCAAAGGTTTCAAAGAGGTTTATCACTTGGAAGGTGGAATTCTGAAATATCTCGAGGAGGTTCCCAAGGTGGATAGCCTCTGGGAGGGGGAGTGCTTTGTGTTtgacaagcgagtctctgtTAAGCATGGGTTGGTGCAAGGAGATTTCAAACTCTGCTATGGTTGTAAACAGCCCATCAGTGATACTGATATGGAAACTCAAGAATATGAATATGGAGTTTCCTGCCCTCACTGTTATGCACTGAAATCAGATGAAGAGAAGGAAAGGGCACGAGCTCGTCAGGGACAATTTGAAAGATGGGGGGTCATAGGTGGTCCCGACAAGGGTCGCCGACCAACATGTAAACCAGATAGTATCAGTAGGAAATCTAACCAGCTTTCAAATTCGATTTA 1385 0.4462 MLRTSRTPLLTLRMLSSSPSSPAAFETRLPSTLRTFDRNSKSSFRHLPLFSNSEKSSQTMTLSRCFSGVSDPIPISVNPEMRSSELESGDPQSLVVVSFYKFADFPDHAHMRKPLKELCEDLRVSGGIILAPEGINGSLCGIRESVEKVLSFIQSDNRLKGLRQVESPVSPEEEAIHHGHSTSSPLAAGEDAPFRWDHVRVKLKKEIVTLGMPNVSPNERVGQYVSPKDWNALISDPDTVVIDVRNNYETRIGKFKGAADPFTTSFREFPSWVDDRFQLKKTDSKHPTVEVGNSGPSADKETDNLKQNMPRVAMYCTGGIRCEKATSLLLSKGFKEVYHLEGGILKYLEEVPKVDSLWEGECFVFDKRVSVKHGLVQGDFKLCYGCKQPISDTDMETQEYEYGVSCPHCYALKSDEEKERARARQGQFERWGVIGGPDKGRRPTCKPDSISRKSNQLSNSI 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01452 461 Pfam Rhodanese-like domain 227 349 IPR001763 -
Bva12g01452 461 ProSiteProfiles Rhodanese domain profile. 235 356 IPR001763 -
Bva12g01452 461 MobiDBLite consensus disorder prediction 165 189 - -
Bva12g01452 461 Hamap tRNA uridine(34) hydroxylase [trhO]. 92 393 IPR020936 -
Bva12g01452 461 Pfam UPF0176 acylphosphatase like domain 95 207 IPR040503 -
Bva12g01452 461 Gene3D - 209 390 IPR036873 -
Bva12g01452 461 SMART rhod_4 225 353 IPR001763 -
Bva12g01452 461 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 204 379 IPR036873 -
Bva12g01452 461 MobiDBLite consensus disorder prediction 288 303 - -
Bva12g01452 461 Gene3D - 83 208 - -
Bva12g01452 461 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 90 441 - -
Bva12g01452 461 MobiDBLite consensus disorder prediction 284 303 - -
Bva12g01452 461 MobiDBLite consensus disorder prediction 431 461 - -
Bva12g01452 461 CDD RHOD_YceA 222 349 - -
Bva12g01452 461 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 90 441 IPR020936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01452 Bva-Chr12 12553792 12557262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01452 90 461 Sulfurtransferasese or Rhodanese AT2G40760 76.267 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01452 - - gmx:100784854 663.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01452 12 12553792 12557262 Bva12g01452 12 12553792 12557262 ECH