Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01451 ATGGGTATCCCTTACCTTGAAAGTGTGACGGCGGTGGAGAGGAAAAGAGTGATCAGAGAGCTTGTGGAAGGTCAAGAGTCTGCAACCCATCTCAAGGTTCTGCTTCAGAAGCATTCTGGGGATGATGGGTCGCTCTCAGCTAAGGAGCTTGTGGCGAAAATACTGAGATCTTTCGACAAGACTCTTTCTGTTCTGACTTCTTCTGAGGACGTTAACGGTGGCGAAGTTTCTCAGATTCTGGCAATTTATGGGGAGAATGGTTCGCCGCAAGCGGCTTCTTGCAATGATCGTGGTTTTGAAGATTCCGGTGAGAGTAGGAAGAGATCGTCGCCGGTACCAACAAAGGATCGGAGAGGTTGCTACAAAAGAAGAAAGAATGCTCAGGCATGGAACGAAGTCTCTTCCAAAACTGATGATAACTATGCATGGAGAAAGTACGGACAGAAGGAGATCCTCAACTCCAAATACCCCagGAGCTACTTCAGGTGCACTCGCAAGTATGATCAAGGTTGCCGGGCAATCAAACAGGTGCAGCGGCTACAAGAAAGTCCGGAATTGTACCAAATAACCTACATTGGCAACCACACATGCAGAGACATGATCAAGGCTCCGCAACTAGTCGTAGATTCCACATCTCCTTGGGAATCGTTTCTTGTGAATCAACCTGAACCAGAGCCATCAAGGGCACCATATGAACAAGACCACCCTTTCAGCTCATCGACTCCTATGATAAAAGAGGAAAACCCAAAACAAGAAACACCAAGCGATGTTACAGACAACATGAAAACCAATCTATGGTCGAATTTGAAGGATTTTGAACCAACGATGTTACCCTCATCCACAAAGATGGCTTCGGATAATGCAGATACCGTGTATTCATGTACTGGATCTCACAGCACTCTGGAAATGGATTTTGGGGTGGATTCTGTTTTTGGCACTGATAGTGATTTCCACTTTGATGAAAGCCAGTTCATCTA 977 0.4585 MGIPYLESVTAVERKRVIRELVEGQESATHLKVLLQKHSGDDGSLSAKELVAKILRSFDKTLSVLTSSEDVNGGEVSQILAIYGENGSPQAASCNDRGFEDSGESRKRSSPVPTKDRRGCYKRRKNAQAWNEVSSKTDDNYAWRKYGQKEILNSKYPRSYFRCTRKYDQGCRAIKQVQRLQESPELYQITYIGNHTCRDMIKAPQLVVDSTSPWESFLVNQPEPEPSRAPYEQDHPFSSSTPMIKEENPKQETPSDVTDNMKTNLWSNLKDFEPTMLPSSTKMASDNADTVYSCTGSHSTLEMDFGVDSVFGTDSDFHFDESQFI 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01451 325 MobiDBLite consensus disorder prediction 90 118 - -
Bva12g01451 325 Gene3D WRKY domain 123 199 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva12g01451 325 MobiDBLite consensus disorder prediction 99 117 - -
Bva12g01451 325 MobiDBLite consensus disorder prediction 233 260 - -
Bva12g01451 325 Pfam WRKY DNA -binding domain 138 198 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva12g01451 325 SUPERFAMILY WRKY DNA-binding domain 136 198 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva12g01451 325 MobiDBLite consensus disorder prediction 218 260 - -
Bva12g01451 325 PANTHER WRKY DNA-BINDING TRANSCRIPTION FACTOR 70 8 307 - -
Bva12g01451 325 ProSiteProfiles WRKY domain profile. 138 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva12g01451 325 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 8 307 IPR044810 GO:0003700
Bva12g01451 325 SMART WRKY_cls 137 199 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01451 Bva-Chr12 12549014 12551146 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01451 12 323 WRKY Transcription Factor Family AT3G56400 38.413 5.03e-55 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bva12g01451 WRKY 4.5e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01451 - - gmx:100170683 331.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01824 12 14871917 14874302 Bva12g01451 12 12549014 12551146 ECH
Bva12g01451 12 12549014 12551146 Bva12g01451 12 12549014 12551146 ECH