Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01450 ATGGACGAGATTGTTTATGGTTGTAAATTAGCCAGACAACTTGAATCAAGCCTAGTCAACTTGGTCTGCCAACCAGATATACTGTCCAGGACCATTGATGAGATAGTCAAGACATTTACTGCTGCTAAAGAGAGGCTACATGTGTCTCCTCATCAATATcaagtttcttccttttctccaATGTTACCTCATGAGGCTTTCAAGGAGCAAGACGCTCAAACGGGTGCAAATATTTTCACGCAAGAATTGATGAGGTCTAGTTTTACACAGCCAATGGATCCTTTGATGATCCAAAGGCAGCAAGTTATTAGAAGCAACGCACCGTTTGAAGGTTCTGAAAGATCAAGGGGATCGGAAGGAGAGGTGCAGCCAGGGCAAGGGTCATCTTTGCGACAGCGAAGAAGCAGGAAAAATGAGGGGCAGAAAAAAACAGAAGTGATTCAGGCAAATCAGTTTGGAAACCCAGAAGTGCCACCGGAAGATGGCTTCGCTTGGAGAAAGTATGGCCAGAAAGAGATACTTGGCTCCAAATACCCAAGGAGTTACTACAGGTGCACCCACCAGAAAATGTATGCATGCCCAGCAAAGAAGCAGGTCCAGCGAGTTGATCATAATCCTAACTTCTTGACTGTAACTTACAGAGGCAGCCACGTCTGCCACATTTCATCAACAGCACCATCGTTTGTTCCGCCACAACTACTAATGGATATCTCACAGGACATGACCCAAACTATTTCACCGCGGTTGTCTCTACATTCCTCCTCCGTGCAGCTCAGCCTCCACGGCGTTGGTGGAGGCGGTGGCATAGCTCCGGCCGGTGGGGATGCCCGGGAGGGACCTTCCACATCTGCCACATATGGAGAAGCTGATATGGCTGATGCCATGTTTAATGTTTCTGGTAGTAGCAGCGGTAACAATATGGAATATCTCCTTCTTCCCGCTGATGAATCGGAACCAGTAGGCGAGAAGAAAAGCTCATG 980 0.4653 MDEIVYGCKLARQLESSLVNLVCQPDILSRTIDEIVKTFTAAKERLHVSPHQYQVSSFSPMLPHEAFKEQDAQTGANIFTQELMRSSFTQPMDPLMIQRQQVIRSNAPFEGSERSRGSEGEVQPGQGSSLRQRRSRKNEGQKKTEVIQANQFGNPEVPPEDGFAWRKYGQKEILGSKYPRSYYRCTHQKMYACPAKKQVQRVDHNPNFLTVTYRGSHVCHISSTAPSFVPPQLLMDISQDMTQTISPRLSLHSSSVQLSLHGVGGGGGIAPAGGDAREGPSTSATYGEADMADAMFNVSGSSSGNNMEYLLLPADESEPVGEKKSS 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01450 326 MobiDBLite consensus disorder prediction 109 160 - -
Bva12g01450 326 PANTHER WRKY TRANSCRIPTION FACTOR 55 1 244 - -
Bva12g01450 326 Pfam WRKY DNA -binding domain 160 219 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva12g01450 326 Gene3D WRKY domain 138 214 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva12g01450 326 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 1 244 IPR044810 GO:0003700
Bva12g01450 326 ProSiteProfiles WRKY domain profile. 160 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva12g01450 326 SMART WRKY_cls 159 221 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva12g01450 326 SUPERFAMILY WRKY DNA-binding domain 157 221 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01450 Bva-Chr12 12545415 12547352 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01450 1 317 WRKY Transcription Factor Family AT2G40740 35.494 1.09e-47 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bva12g01450 WRKY 3e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01450 - - gmx:100792150 264.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01450 12 12545415 12547352 Bva12g01450 12 12545415 12547352 ECH