Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01447 ATGGCTTCTGGGTCTTCTGCTTCTTCAAATTGGGTCATGGAAAACGGGGACGTCCCTCATGTTTTGGCTGTTGATGACAACCTCATTGATCGCAAACTTGTTGAGAAGCTGCTCAGAAATTCTTCTTGCAGAGTGACAACTGCAGAAAATGGGCCACGGGCATTGGAATTTCTGGGCTTGGCTAGTAATGAACAGAAGAACCTGGGAGCTGGTTCCAAAGTAAATTTGGTTATCACAGATTACTGCATGCCAGGGATGACAGGCTATGAACttcttaagaaaattaagGAATCATCTGTCATGAAAGAGGTCCCAGTTGTGATTGTGTCATCAGAGAACATCCCAACTCGTATTAACGAGTGTATGGAGAAAGGAGCCCAGATGTTTATCCAAAAACCCCTCAAACAATCTGATGTAAATAAACTGGCTTGTCAGTTGATGAACTGCAGAAGTTA 455 0.4242 MASGSSASSNWVMENGDVPHVLAVDDNLIDRKLVEKLLRNSSCRVTTAENGPRALEFLGLASNEQKNLGAGSKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVIVSSENIPTRINECMEKGAQMFIQKPLKQSDVNKLACQLMNCRS 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01447 151 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR17-LIKE 9 149 - -
Bva12g01447 151 SMART REC_2 19 143 IPR001789 GO:0000160
Bva12g01447 151 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 149 IPR045279 GO:0009736
Bva12g01447 151 SUPERFAMILY CheY-like 19 147 IPR011006 -
Bva12g01447 151 Gene3D - 17 150 - -
Bva12g01447 151 Pfam Response regulator receiver domain 21 140 IPR001789 GO:0000160
Bva12g01447 151 ProSiteProfiles Response regulatory domain profile. 20 147 IPR001789 GO:0000160
Bva12g01447 151 CDD REC_typeA_ARR 21 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01447 Bva-Chr12 12535325 12536244 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01447 20 151 Response Regulator Gene Family AT3G56380 73.881 6.67e-67 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bva12g01447 Response_reg 4.8e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01447 K14492 - gmx:100499827 249.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01447 12 12535325 12536244 Bva12g01447 12 12535325 12536244 ECH