Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bva12g01440 | atggcTGATCTGCGATACCGACTTCACCGCCTTCTGCTTGACACAGATTCAACCTCAATCTCAACAGGTAATGCAAATAGGACAAGTAGGTTCTCAAGAGAGGCCAATTTTGACACCAACATGGTGATAATCTTAGCAGCTTTGCTTTGTGCATTGATATGTGCTCTGGGGCTAAATTCAATTGTGAGATGTGCTCTAAGATGCAGCCGTAGGTTTGCTTCTGAGACAGCAGAGGAGGTAGCTTCACGTTTAGCTGCTAAAGGCCTGAAGAAGAGTGCATTACGTCGGATCCCTATAGCTGTTTATGGTTCCTCAGGTACTAATTTTCCAGCCACAGATTGTCCCATTTGCCTTGGAGACTTTTTGGATGGGGAGAAAGTCAGAATTCTACCAAAATGCAACCATGGCTTCCATGTTTGGTGCATAGACACATGGCTTCTCTCACACTCATCTTGTCCAACTTGTAGACACTTTTTGCTTGAACATCCTGCAGCTACGCCTGAAGCAGCGGTTGCAGCTGTAGCCATGACAGCAGCTGCTGAAACTGGGACCAGGCATCATGTAGAAAATACCTCAGGAGGACATGAATCTGAGGCTGGATCTACAGCCGTGGAAGAGGTTTA | 623 | 0.4591 | MADLRYRLHRLLLDTDSTSISTGNANRTSRFSREANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFASETAEEVASRLAAKGLKKSALRRIPIAVYGSSGTNFPATDCPICLGDFLDGEKVRILPKCNHGFHVWCIDTWLLSHSSCPTCRHFLLEHPAATPEAAVAAVAMTAAAETGTRHHVENTSGGHESEAGSTAVEEV | 207 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bva12g01440 | 207 | MobiDBLite | consensus disorder prediction | 184 | 207 | - | - | |
Bva12g01440 | 207 | ProSiteProfiles | Zinc finger RING-type profile. | 114 | 156 | IPR001841 | - | |
Bva12g01440 | 207 | SUPERFAMILY | RING/U-box | 107 | 164 | - | - | |
Bva12g01440 | 207 | SMART | ring_2 | 114 | 155 | IPR001841 | - | |
Bva12g01440 | 207 | Pfam | Ring finger domain | 113 | 156 | IPR001841 | - | |
Bva12g01440 | 207 | PANTHER | RING-H2 FINGER PROTEIN ATL74 | 9 | 175 | - | - | |
Bva12g01440 | 207 | PANTHER | RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED | 9 | 175 | - | - | |
Bva12g01440 | 207 | CDD | RING-H2_PA-TM-RING | 113 | 156 | - | - | |
Bva12g01440 | 207 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 88 | 162 | IPR013083 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bva12g01440 | Bva-Chr12 | 12499437 | 12501460 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bva12g01440 | 8 | 164 | C3H Transcription Factor Family | AT3G10910 | 58.434 | 9.05e-60 | 183 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bva12g01440 | - | K19040 | pvy:116129746 | 248.825 |