Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01439 ATGTCGTTTCCCTCAAGAGGTTCCTTTCACCGGCGAGCTCAATCAGAGGTGCAATTCCGGATCCCCGACCACTTCGATCTAGATTCAGGACCGTTGGATGCTCCTTCCGCCAATTTTGAAGATCTAGGATCAGAGGATGACCTCTTCTGCGCGTACATGGATTTTGACAAATCCAGATCCAATTCCCAACACGGATCCTATGCTCCGAAACCCGATACTGGCAATGCTGGTCCGTTGGAGAGAAGCGGTGATGACGGGCACGTCGGAAGTAGTGGTGAGGTTGAGAAAAAGGGGAGACCCAGGCATCGGCACAGCAATTCAGTTGATGGGTCCCTCTTGGAGAGCATTGACACCAAGAAGGCCATGGCTCCTGATAAGCTTGCTGAGTTATGGACCATTGATCCCAAGCGAGCAAAGAGGATTCTGGGAAATCGCCAATCTGCGGCTcgttcaaaagaaaagaaagctcgTTATGTATTAGAACTTGggagaaaatttcaaacacTTCAAACTGAAGCGACTACTCTGTATGCTCAATTAAGTCTTTTCCAGaGAGATACAGCTGGTCTGAGTACAGAAAATACAGAACTTAAGCTTCGGCTACAAGCTATGGAGCAACAAGCGAAGTTACATGATGCTCTAAATGAAGCACTGAAGAAAGAAGTTGATAGGCTGAAGATTGCTACTGGAGAGACAGTAACTCCCACTGATAACTATGGTTTGGGAATGCATCAAATTTCATACTCCCAAGCTTCCTTCTTCTCACATCAGCCACAACATGGGTCAAGTGAACGTCATTCCATACAAATGCAGCAGTTACATTCACTCGGATCTAACATTTCTGCTCCCCGTCAGCATATGGTTGCCACAGCCCACCCACATAACTTGTCAGAAATATTGTCTCAGGACTCTATTGGCCAATTCCAAGGGCTTGAGATAAGCAGCAGGGGTTCTAATCTTCTGATGCCTGACGGTGCCCCCTATTCCTGCTA 992 0.4546 MSFPSRGSFHRRAQSEVQFRIPDHFDLDSGPLDAPSANFEDLGSEDDLFCAYMDFDKSRSNSQHGSYAPKPDTGNAGPLERSGDDGHVGSSGEVEKKGRPRHRHSNSVDGSLLESIDTKKAMAPDKLAELWTIDPKRAKRILGNRQSAARSKEKKARYVLELGRKFQTLQTEATTLYAQLSLFQRDTAGLSTENTELKLRLQAMEQQAKLHDALNEALKKEVDRLKIATGETVTPTDNYGLGMHQISYSQASFFSHQPQHGSSERHSIQMQQLHSLGSNISAPRQHMVATAHPHNLSEILSQDSIGQFQGLEISSRGSNLLMPDGAPYSC 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01439 330 PANTHER BZIP TRANSCRIPTION FACTOR 18 5 326 - -
Bva12g01439 330 MobiDBLite consensus disorder prediction 58 116 - -
Bva12g01439 330 CDD bZIP_plant_RF2 137 188 IPR044759 GO:0003700|GO:0006355
Bva12g01439 330 Gene3D - 136 186 - -
Bva12g01439 330 MobiDBLite consensus disorder prediction 86 108 - -
Bva12g01439 330 SUPERFAMILY Leucine zipper domain 136 190 IPR046347 GO:0003700|GO:0006355
Bva12g01439 330 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 134 197 IPR004827 GO:0003700|GO:0006355
Bva12g01439 330 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 5 326 - -
Bva12g01439 330 Coils Coil 187 221 - -
Bva12g01439 330 Pfam bZIP transcription factor 136 193 IPR004827 GO:0003700|GO:0006355
Bva12g01439 330 SMART brlzneu 132 196 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01439 Bva-Chr12 12494224 12497753 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01439 4 320 bZIP Transcription Factor Family AT2G40620 54.572 2.81e-104 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Bva12g01439 bZIP_1 6.5e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01439 - - zju:107414005 397.127