Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01429 ATGACTTTCAAGAGAAGGAACGGAGGGCGCAACAAGCATGGCCGTGGACATGTCAAGTTCATTCGCTGCTCCAACTGCGGCAAATGCTGCCCTAAGGACAAATCAATTAAGAGGTTCCTTGTGAGGAACATTGTGGAGCAAGCAGCCGTTAGAGATGTCCAGGAAGCTTGTGTCTATGAGCAATACACTCTTCCCAAGCTATATGTCAAGATGCAGTACTGTGTGTCTTGTGCCATTCACTCTCATGTTGTCAGGGTGCGGTCTCGCACTAATAGGAGAAACCGTGAGCCACCACAGCGCTTCATGAGGCGCAGGGATGATCTGCCAAGGCCTGGTCAGCCCGGTCAAGGACCTCGCCCTGCTGGTGCTGTAGCTCCTCCTCGCACTTA 389 0.5244 MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKSIKRFLVRNIVEQAAVRDVQEACVYEQYTLPKLYVKMQYCVSCAIHSHVVRVRSRTNRRNREPPQRFMRRRDDLPRPGQPGQGPRPAGAVAPPRT 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01429 129 ProSitePatterns Ribosomal protein S26e signature. 73 80 IPR000892 GO:0003735|GO:0005840|GO:0006412
Bva12g01429 129 Gene3D Ribosomal protein S26e 1 114 IPR038551 -
Bva12g01429 129 PANTHER 40S RIBOSOMAL PROTEIN S26 1 129 IPR000892 GO:0003735|GO:0005840|GO:0006412
Bva12g01429 129 PANTHER 40S RIBOSOMAL PROTEIN S26 1 129 - -
Bva12g01429 129 Pfam Ribosomal protein S26e 1 105 IPR000892 GO:0003735|GO:0005840|GO:0006412
Bva12g01429 129 MobiDBLite consensus disorder prediction 86 129 - -
Bva12g01429 129 MobiDBLite consensus disorder prediction 90 110 - -
Bva12g01429 129 MobiDBLite consensus disorder prediction 113 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01429 Bva-Chr12 12457997 12459743 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01429 1 116 Cytoplasmic Ribosomal Protein Gene Family AT3G56340 84.483 1.44e-69 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01429 K02976 - fve:101302876 208.379