Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01422 ATGACCAACATTTGCTGCGGCCTCTTTGGAGAGAGAGTGGCGGTACTAGGTTCCCAATTTCTACGAAGAACCTGGACTATCTGCTCCAATTCAAACCCTAGCCTGAGAATTTTACGCAAGGATCATCCCCAGCTGCGGAAGCGATTCGGATTTTCGTTATCTGCGTCATCTTCGTCGTCTTTTACCATTTTCTGTCGAATGGATGCTACGGCTGGGCTTTCCTCTTTGTCGAATGGAGGGGATGGTGTTGTTCGCTTCCCCTTGTCTCCTGCGAGCGCTTTGGTCATTCAGAAGGGTGACATCACCGAGTGGTTCGTCGAGGGGTCCTCCTCCGCAATAGTAAATCCAGCAAATGAGCGAATGCTTGGAGGTGGTGGTGCGGATGGagCCATACATAGGGCTGCTGGCCCAGATCTTCTGCAAGCATGCTACAGTGTTCCAGAAGTCAGACCTGGAATTCGCTGCCCAATAGGGGAAGCAAGGATCACACCAGGTTTTAAACTCCCTGCTTCTCATGTTATTCATACGGTTGGACCAATCTATAATTCTGATAGTAACCCTGCTGCCTCTCTTGCAAGTGCTTACAGGAATAGTTTGAGGGTTgcgaaagaaaataacattcaGTATATAGCTTTTCCAGCTATATCTTGTGGTGTATATGGGTATCCTTACGATGAGGCTGCCACAGTAGCTATTTCTACTATCAGGGAGTTTCGAAATGACTTTAAGGAGGTCCACTTTGTTCTCTTCTCCCCTGAAATTTACGGTGTTTGGTTAAATAAGGCGAATGAATTGCTGAATAATTA 806 0.4591 MTNICCGLFGERVAVLGSQFLRRTWTICSNSNPSLRILRKDHPQLRKRFGFSLSASSSSSFTIFCRMDATAGLSSLSNGGDGVVRFPLSPASALVIQKGDITEWFVEGSSSAIVNPANERMLGGGGADGAIHRAAGPDLLQACYSVPEVRPGIRCPIGEARITPGFKLPASHVIHTVGPIYNSDSNPAASLASAYRNSLRVAKENNIQYIAFPAISCGVYGYPYDEAATVAISTIREFRNDFKEVHFVLFSPEIYGVWLNKANELLNN 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01422 268 ProSiteProfiles Macro domain profile. 81 266 IPR002589 -
Bva12g01422 268 SUPERFAMILY Macro domain-like 94 261 IPR043472 -
Bva12g01422 268 PANTHER GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED 25 267 - -
Bva12g01422 268 CDD Macro_OAADPr_deacetylase 94 263 - -
Bva12g01422 268 Pfam Macro domain 114 231 IPR002589 -
Bva12g01422 268 SMART YBR022w_8 93 231 IPR002589 -
Bva12g01422 268 PANTHER MACRO DOMAIN-CONTAINING PROTEIN VPA0103-LIKE ISOFORM X1 25 267 - -
Bva12g01422 268 Gene3D Leucine Aminopeptidase, subunit E, domain 1 85 268 IPR043472 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01422 Bva-Chr12 12427118 12429762 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01422 99 204 C2H2 Transcription Factor Family AT5G01310 35.294 2.03e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01422 K23518 - qsu:111985090 343.969