Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bva12g01422 | ATGACCAACATTTGCTGCGGCCTCTTTGGAGAGAGAGTGGCGGTACTAGGTTCCCAATTTCTACGAAGAACCTGGACTATCTGCTCCAATTCAAACCCTAGCCTGAGAATTTTACGCAAGGATCATCCCCAGCTGCGGAAGCGATTCGGATTTTCGTTATCTGCGTCATCTTCGTCGTCTTTTACCATTTTCTGTCGAATGGATGCTACGGCTGGGCTTTCCTCTTTGTCGAATGGAGGGGATGGTGTTGTTCGCTTCCCCTTGTCTCCTGCGAGCGCTTTGGTCATTCAGAAGGGTGACATCACCGAGTGGTTCGTCGAGGGGTCCTCCTCCGCAATAGTAAATCCAGCAAATGAGCGAATGCTTGGAGGTGGTGGTGCGGATGGagCCATACATAGGGCTGCTGGCCCAGATCTTCTGCAAGCATGCTACAGTGTTCCAGAAGTCAGACCTGGAATTCGCTGCCCAATAGGGGAAGCAAGGATCACACCAGGTTTTAAACTCCCTGCTTCTCATGTTATTCATACGGTTGGACCAATCTATAATTCTGATAGTAACCCTGCTGCCTCTCTTGCAAGTGCTTACAGGAATAGTTTGAGGGTTgcgaaagaaaataacattcaGTATATAGCTTTTCCAGCTATATCTTGTGGTGTATATGGGTATCCTTACGATGAGGCTGCCACAGTAGCTATTTCTACTATCAGGGAGTTTCGAAATGACTTTAAGGAGGTCCACTTTGTTCTCTTCTCCCCTGAAATTTACGGTGTTTGGTTAAATAAGGCGAATGAATTGCTGAATAATTA | 806 | 0.4591 | MTNICCGLFGERVAVLGSQFLRRTWTICSNSNPSLRILRKDHPQLRKRFGFSLSASSSSSFTIFCRMDATAGLSSLSNGGDGVVRFPLSPASALVIQKGDITEWFVEGSSSAIVNPANERMLGGGGADGAIHRAAGPDLLQACYSVPEVRPGIRCPIGEARITPGFKLPASHVIHTVGPIYNSDSNPAASLASAYRNSLRVAKENNIQYIAFPAISCGVYGYPYDEAATVAISTIREFRNDFKEVHFVLFSPEIYGVWLNKANELLNN | 268 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bva12g01422 | 268 | ProSiteProfiles | Macro domain profile. | 81 | 266 | IPR002589 | - | |
Bva12g01422 | 268 | SUPERFAMILY | Macro domain-like | 94 | 261 | IPR043472 | - | |
Bva12g01422 | 268 | PANTHER | GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED | 25 | 267 | - | - | |
Bva12g01422 | 268 | CDD | Macro_OAADPr_deacetylase | 94 | 263 | - | - | |
Bva12g01422 | 268 | Pfam | Macro domain | 114 | 231 | IPR002589 | - | |
Bva12g01422 | 268 | SMART | YBR022w_8 | 93 | 231 | IPR002589 | - | |
Bva12g01422 | 268 | PANTHER | MACRO DOMAIN-CONTAINING PROTEIN VPA0103-LIKE ISOFORM X1 | 25 | 267 | - | - | |
Bva12g01422 | 268 | Gene3D | Leucine Aminopeptidase, subunit E, domain 1 | 85 | 268 | IPR043472 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bva12g01422 | Bva-Chr12 | 12427118 | 12429762 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bva12g01422 | 99 | 204 | C2H2 Transcription Factor Family | AT5G01310 | 35.294 | 2.03e-06 | 47.0 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bva12g01422 | K23518 | - | qsu:111985090 | 343.969 |