Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01418 ATGTCCAGAGAAAGGGAGAGATTCGATGAGATAGGAAAGAAGATCAAGCGGGAAGGAGATGTTTCTTTTCCAATGGGTAGAAGACACATGTTGGGTCCTCCTGGAACCCTAAATACCATTACTCCTTGTGCAGCATGTAAGCTCTTGAGAAGAAGATGTGCCCAAGAATGTCCCTTTTCTCCATATTTCTCTCCTCACGAGCCCCAGAAGTTTGCTTCTGTCCACAAAGTATTTGGTGCCAGTAACGTCTCAAAGATGCTCATGGAGGTGCCGGAGAGTCAAAGAGCTGATGCAGCGAATAGTCTAGTTTATGAGGCTAATGTGAGGCTAAGAGACCCAGTTTATGGATGCATGGGTGCAATTTCTGTTCTGCAACAGCAGGTTCAATCTTTACAAGCTGAACTTAATGCAGTAAGGGCAGAAATACTTAAATACAAACTTAGGGAAGCTAACATGATACCCTCCTCTCATGTTACTATGCTCCCTTCTTCTGGGGCTGTGTCCGTTGCTGCTCCACCACCGGGACCACCACAGCCACCGccacctccaccaccaccttcTCTCCCTCCTACTTCTTCTACTTCTTCCATTTATTCCCAACAGAGGGCTCCCACCAATTATAGCACAATTTCAAGTGATCATAATATTTCctattttggtta 662 0.432 MSRERERFDEIGKKIKREGDVSFPMGRRHMLGPPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPQKFASVHKVFGASNVSKMLMEVPESQRADAANSLVYEANVRLRDPVYGCMGAISVLQQQVQSLQAELNAVRAEILKYKLREANMIPSSHVTMLPSSGAVSVAAPPPGPPQPPPPPPPPSLPPTSSTSSIYSQQRAPTNYSTISSDHNISYFG 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01418 220 Coils Coil 121 148 - -
Bva12g01418 220 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 26 220 - -
Bva12g01418 220 ProSiteProfiles LOB domain profile. 41 142 IPR004883 -
Bva12g01418 220 Pfam Lateral organ boundaries (LOB) domain 42 139 IPR004883 -
Bva12g01418 220 MobiDBLite consensus disorder prediction 165 220 - -
Bva12g01418 220 PANTHER LOB DOMAIN-CONTAINING PROTEIN 15 26 220 - -
Bva12g01418 220 MobiDBLite consensus disorder prediction 169 191 - -
Bva12g01418 220 MobiDBLite consensus disorder prediction 192 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01418 Bva-Chr12 12408546 12409908 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01418 27 169 AS2 family AT2G40470 85.034 1.29e-75 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Bva12g01418 LOB 1.4e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01418 - - lang:109326265 318.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01787 12 14692941 14694561 Bva12g01418 12 12408546 12409908 ECH
Bva12g01418 12 12408546 12409908 Bva12g01418 12 12408546 12409908 ECH