Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01413 ATGGCTTTCAGAATTCTCAGACATGGCCTTCTCGAGAAGTTTTGTTACTGcatacaaaacaaatttacaaCGACATACTTGCCTTTCCTGGCGATTGCGTGCGCCTCTCCAATACCCGCTCATAAGGCTGTTTTGGCGACAAGTTCAGAAATATTCAAGATCATGCTAGATTCTGATGAATGCAAAGTTGCACCAAGTAAGACGATAACGTTATCAGAGGTGAAGTACGAAGAGTTAGAGTGTCTGTGGGAGTTTCTATACAGTGGGACATTGGCTCCAGAAAAAGTGGAGAAGCATAAATTGCAGGAAACCACATTAAATTTCTTAGTTGAAAACATAAGGGACATAGCTTCGTCCTCTAGGTTTGAAGCATTTGTCCTCAAGCTTCCACGACCTTGTACAGGCAACTCTTCCAAATG 419 0.4105 MAFRILRHGLLEKFCYCIQNKFTTTYLPFLAIACASPIPAHKAVLATSSEIFKIMLDSDECKVAPSKTITLSEVKYEELECLWEFLYSGTLAPEKVEKHKLQETTLNFLVENIRDIASSSRFEAFVLKLPRPCTGNSSK 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01413 139 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 34 - -
Bva12g01413 139 SUPERFAMILY POZ domain 36 98 IPR011333 -
Bva12g01413 139 PANTHER BTB/POZ DOMAIN CONTAINING PROTEIN, EXPRESSED-RELATED 36 99 IPR044784 -
Bva12g01413 139 CDD BTB_POZ_ZBTB_KLHL-like 38 91 - -
Bva12g01413 139 Gene3D Potassium Channel Kv1.1; Chain A 14 121 IPR011333 -
Bva12g01413 139 Pfam BTB/POZ domain 33 100 IPR000210 GO:0005515
Bva12g01413 139 ProSiteProfiles BTB domain profile. 30 95 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01413 Bva-Chr12 12378327 12379239 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Bva12g01413 BTB 1.3e-12 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01413 K10523 - gmx:100814664 102.834