Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01410 ATGTCGCCGGTGGCCGGAGTAGACGTCCCTCTCTTGCCGGATTCCAAATCTGCGGAGAAGGCAGCATCTGTCTCTGGCGCCTTATTCAATGTCGCGACCAGCATAATTGGCGCGGGGATCATGTCAATTCCGGCGACTATTAAGGTACTGGGAGTGATTCCGGCTTTCCTGATGATTCTGATCATCGGTGTGCTGGCGGAAGTATCAGTGGACTTCCTGATGAGGTTTACGCATTCCGGCGAGACGACGACGTATGCTGGTGTAATGAAGGAATCGTTCGGCCCGGCAGGAGCTGTGATCACACAAGTTTGTGTCATGATTACCAACCTTGGATGTTTGATTATGTACCAAATCATCATCGGGGATGTGCTCTCTGGGAATCAATCTGAAGGTGAAGCACACTTGGGGATTTTGCAGCAGTGGTTTGGTTTTCACTGGTGGACATCCCGTGACTTTGCTATGCTTTTCACCTTGGTCTTCATTATGCTTCCATTGGCCTTGTATAAGCGTGTAGAATCCTTGAGATTCAGTTCAGCAATATCAACCCTCCTCGCGGTGGCATTTGTTGGCATATGTTCTGGAATGGCAATTGCTGCTCTTGCCCAAGGAAAAATACACATTCCAAGGTTGCTTCCTCAGTTGGACCACCAGACTTCCTTCTTTGATCTATTTACTGCTATTCCAGTCATAGTCACGGCCTTCACGTTTCACTTTAATGTGCATCCAATCGGGTTTGAGCTCGCAAAGCCTTCTGATATGATGTGTGCAGTTCGAGTGGCGCTCATACTATGTGCTGCCATCTACTTTGCAATAGGGGTATTTGGGTACCTTTTGTTTGGAGACACAATCCAGTCAGATATACTAATCAATTTCGATCAGAATACTGGTTCTGCAGTTGGTTCTctgttaaataatttagttcGATTAAGCTATGCATTCCATGTCATGCTAGTGTTCCCTCTCTTGAATTTCTCTCTGAGAGCCAACATTGATGAACTCCTTTTCCCAAATAAGCGTCAACTAGCGAAGGACACCAAAAGATTTGTGATCCTCACCCTTGTGCTCCTGTTCTTCAGCTACCTTATTGCTATAGCACTCCCTGATATATGGTACTTCTTTCAGCTTGTGGGTTCAACTTCGGCACTCTGCCTTGCCTTCATCTTCCCTGGTGCTATTGCTTTGagGGATGCCCATGGCATATCAAAGAGAAAGGACAAAATCATAGCACTGATAATGGTTCTACTGGCTGTGGTCGCAAGCGCCAATGCCATCTCCATCAACATATATAACTCTTTCAGCGACAAACCATA 1310 0.458 MSPVAGVDVPLLPDSKSAEKAASVSGALFNVATSIIGAGIMSIPATIKVLGVIPAFLMILIIGVLAEVSVDFLMRFTHSGETTTYAGVMKESFGPAGAVITQVCVMITNLGCLIMYQIIIGDVLSGNQSEGEAHLGILQQWFGFHWWTSRDFAMLFTLVFIMLPLALYKRVESLRFSSAISTLLAVAFVGICSGMAIAALAQGKIHIPRLLPQLDHQTSFFDLFTAIPVIVTAFTFHFNVHPIGFELAKPSDMMCAVRVALILCAAIYFAIGVFGYLLFGDTIQSDILINFDQNTGSAVGSLLNNLVRLSYAFHVMLVFPLLNFSLRANIDELLFPNKRQLAKDTKRFVILTLVLLFFSYLIAIALPDIWYFFQLVGSTSALCLAFIFPGAIALRDAHGISKRKDKIIALIMVLLAVVASANAISINIYNSFSDKP 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01410 436 PANTHER AMINO ACID TRANSPORTER 3 434 - -
Bva12g01410 436 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 3 434 - -
Bva12g01410 436 Pfam Transmembrane amino acid transporter protein 22 416 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01410 Bva-Chr12 12360739 12362895 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01410 1 430 Amino Acid or Auxin Permease AAAP Family AT3G56200 59.815 2.63e-180 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01410 - - gmx:100813056 671.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01410 12 12360739 12362895 Bva12g01410 12 12360739 12362895 ECH