Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01379 ATGACGAGAATGGAAGAGAACTGGAAATTCAGTCCGTTCAGGGGATATTTGCGCTTTGTGGTGGTGTGGTTGTTGTTCCAGAGCTTGGGTTTGTGCTGGTCTTTGAATGACGACGGTAAAGCTCTATTGAAGTTGAGGCAGAGAGTGGTGAGTGACCCTTTTGGTGCTTTGTCAAATTGGATTGATCATGGAGAGGTTGACCCTTGTAACTGGTTCGGAGTTGAGTGCTCAGAAGGAAGAGTGGTGGTTTTGAATTTGAGAGATCTTTGCCTTGGTGGAACTCTGGCACCTGAACTTGCAAACCTTGCTCACGTAAAGTCAATAGTTTTGCGGAACAATTCTTTCTCTGGAATCATCCcagaaaaaattgtagaacTGAAAGAGTTAGAAGTTTTGGATTTGGGATATAACAACTTCAGTGGACCTCTACCAGCAGATCTTGGGAGTAATTTCTCACTAGCAATCCTTTTGCTGGATAACAATGAGCTTCTTGGTGGATTCTCTCCtgaaattaatgaattgaaGATGCTTTCTGAATGTCAAGTAGATGAAAACCAGTTAACAAATACAGCTAAAATGGCATCTTGTACCGGAAGATCCAGCACAAGtcATGGTAGCCAAGGGAAAGCAGTTCGGATACTAAGTGAACCTCCTAGGCCTGATCCTCATAACCGCGAAACATTTCCACCACCGGAGACCTCTCCGGCTCCATCCCATTTGCCGGATTCTCCCTCCCCAACTGCAACAGCACCAGTGCCACAGCCAGCTTCCCCTGGAAAAACTGCTTCTGCTTCGCCTTCTCCGCAGTCTACATCCTCCTCTGGAAAACAATCTAAAAGTACCACAAAAGTTTTGGCTGGAGTTTTTGGTGgtgtttttcttctcatttcaaTCATTGTTGTATATCTCTGGAAAACCAATAAGGTAGCGACTGTCAAACCTTGGGCCACTGGATTAAGTGGACAGCTTCAGAAGGCATTTGTAAACGGTGTGCCAAAGCTGAAGAGATCAGAGCTTGAAGTAGCTTGTGAAGAATTTAGCAACGTAATTAGTACTTCACCTATAGGTACAGTGTACAAAGGGATTTTATCAAGTGGAGTTGAAATAGCTGTAGCTTCTGTTACTGCAACTGACTCCAAgaattggtcaaagaatttAGAAGCACAGTTTTTGAGGAAGATGGATGCATTATCAAAAGTGAACCACAAGAATTTTGTCAACCTTCTTGGATACTGTGAAGAAGACGAACCTTTCACCCGAATGGTGGTTTTTGAATATGCCCCTAATGGAACACTCTTTGAGCATTTACACATTAAGGAAGCTGAGCACTTGGATTGGAGAACAAGACTTAGGATTGCAATGGGCATGGCCTACTGCCTCCAACATATGCACCGGGTTGACCCTCCTGTAGTCCATAGCTATCTGAATTCTCAAGCTGTCTATCTTACTGATGACTATGCTGGCAAAATATCGGATTTGAGTATCTTGACCGAAACAGCTTCAGCCGAGACAAAAGCTGTGGGCAAGAAACATGCTCATGTGTCGTTAGCAAGTAATGTCTATAGCTTTGgtgttatattatttgaaatggTAACAGGTCGGCTCCCTTATTCAGTAGACAATGATGGCTCACTTGAAGACTGGGCATCACACTATTTACAAGGGAACCAGCAGCTCAAAGAGAAAGTGGATCCAACTCTGGAATCTTTCCAAGAAGAGCAGTTAGAACAAATTGCTGAATTGATAAAATCTTGTGTCCACCCTAACCCTAAGGAGAGACCGACAATGAAAGAAGTGAGTGCGAGACTGAAAGAGATAACAGGAATAACAGCAGAGGGGGCAGTTCCCAGACTTTCTCCACTTTGGTGGGCAGAGCTTGAGATTTCTTCTGTAGATGCAAGCTG 1904 0.4217 MTRMEENWKFSPFRGYLRFVVVWLLFQSLGLCWSLNDDGKALLKLRQRVVSDPFGALSNWIDHGEVDPCNWFGVECSEGRVVVLNLRDLCLGGTLAPELANLAHVKSIVLRNNSFSGIIPEKIVELKELEVLDLGYNNFSGPLPADLGSNFSLAILLLDNNELLGGFSPEINELKMLSECQVDENQLTNTAKMASCTGRSSTSHGSQGKAVRILSEPPRPDPHNRETFPPPETSPAPSHLPDSPSPTATAPVPQPASPGKTASASPSPQSTSSSGKQSKSTTKVLAGVFGGVFLLISIIVVYLWKTNKVATVKPWATGLSGQLQKAFVNGVPKLKRSELEVACEEFSNVISTSPIGTVYKGILSSGVEIAVASVTATDSKNWSKNLEAQFLRKMDALSKVNHKNFVNLLGYCEEDEPFTRMVVFEYAPNGTLFEHLHIKEAEHLDWRTRLRIAMGMAYCLQHMHRVDPPVVHSYLNSQAVYLTDDYAGKISDLSILTETASAETKAVGKKHAHVSLASNVYSFGVILFEMVTGRLPYSVDNDGSLEDWASHYLQGNQQLKEKVDPTLESFQEEQLEQIAELIKSCVHPNPKERPTMKEVSARLKEITGITAEGAVPRLSPLWWAELEISSVDAS 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01379 634 SUPERFAMILY Protein kinase-like (PK-like) 330 603 IPR011009 -
Bva12g01379 634 Gene3D Transferase(Phosphotransferase) domain 1 427 613 - -
Bva12g01379 634 MobiDBLite consensus disorder prediction 254 280 - -
Bva12g01379 634 Pfam Leucine rich repeat N-terminal domain 36 77 IPR013210 -
Bva12g01379 634 PANTHER BNAA09G55080D PROTEIN 4 634 - -
Bva12g01379 634 SUPERFAMILY L domain-like 37 191 - -
Bva12g01379 634 Pfam Protein tyrosine and serine/threonine kinase 348 602 IPR001245 GO:0004672|GO:0006468
Bva12g01379 634 MobiDBLite consensus disorder prediction 227 253 - -
Bva12g01379 634 Gene3D Ribonuclease Inhibitor 35 209 IPR032675 -
Bva12g01379 634 Gene3D Phosphorylase Kinase; domain 1 316 426 - -
Bva12g01379 634 MobiDBLite consensus disorder prediction 194 209 - -
Bva12g01379 634 ProSiteProfiles Protein kinase domain profile. 344 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g01379 634 PANTHER PROTEIN MALE DISCOVERER 2 4 634 - -
Bva12g01379 634 MobiDBLite consensus disorder prediction 194 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01379 Bva-Chr12 12206172 12209702 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01379 35 609 Receptor kinase-like Gene Family AT5G16000 26.000 9.53e-49 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Bva12g01379 PK_Tyr_Ser-Thr 3e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01379 - - gmx:100807163 812.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01379 12 12206172 12209702 Bva12g01379 12 12206172 12209702 ECH