Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01372 ATGAAAGCCATGAAGGGCTACGAGCCCCGTTCAAGCTCTTCCTGTGCAGCCTGCAAGTTCTTGAAGAGAAGATGCATTCCCAATTGCATATTTGCACCTTACTTTCGCTCTGATGAGTGCAAGAAATTTGCCAAAGTTCACAAGGTGTTTGGAGCCAGCAATGTGAGCAAGATCCTTGTAGAAGTTCCAGAGGAACAGAGAGAGGACACGGTGAATTCGCTGGCGTACGAGGCTGAGGCAAGGCTTAGAGACCCGGTTTATGGATGCATTGGTGCCATTGCTTTGTTGCAGAGGAAGATGGTGGAGCTTCAACATGACTTGGCCATTGCAAAAGCTCGTCTTGCTCGCTATACGACTGCTACTGCTTCTGCTACCATCCCTTCTCCTGCTGATATCTTGAATTCCCATGTTAGCTTGGCTCCTTTCCCGGACTTCTCCACTTGCAGTGATTTCAATGATAGCTTCTACCTCAgttcttcttctccatctcAATTATTGAGCCGAAGTGAAACGATGGatgattttattcaaatcccatatatattttg 548 0.4361 MKAMKGYEPRSSSSCAACKFLKRRCIPNCIFAPYFRSDECKKFAKVHKVFGASNVSKILVEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQRKMVELQHDLAIAKARLARYTTATASATIPSPADILNSHVSLAPFPDFSTCSDFNDSFYLSSSSPSQLLSRSETMDDFIQIPYIF 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01372 182 Coils Coil 93 113 - -
Bva12g01372 182 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 174 - -
Bva12g01372 182 Pfam Lateral organ boundaries (LOB) domain 14 111 IPR004883 -
Bva12g01372 182 ProSiteProfiles LOB domain profile. 13 114 IPR004883 -
Bva12g01372 182 PANTHER LOB DOMAIN-CONTAINING PROTEIN 21 4 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01372 Bva-Chr12 12178062 12178873 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01372 4 151 AS2 family AT3G11090 66.216 2.87e-66 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Bva12g01372 LOB 5.9e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01372 - - gmx:100777635 281.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01372 12 12178062 12178873 Bva12g01372 12 12178062 12178873 ECH