Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01371 ATGACCCGCCCGAGTCCAAGTTCAAACCCGCGCACCGCGAATCGGAGCGCTGGCCGCGAGGACTGTTGGAGCGAGGGTGCTACTGAGATTTTGATCGAAGCATGGGGCGACCGTTATATCCAGCTCAACCGTGGTAATCTCCGTCAGAAGGATTGGAAGGAAGTCGCCGACGCCGTCAACGCCCGTGAAGACGGCATCAAGCCTCACAAGACGGATATTCAGTGTAAGAACCGGATCGATACCCTGAAGAAGAAATACAAGGTCGAGAAGTCGAAGTCGCCGCCGTCTAAATGGGTTTTCTACCACCGCCTTGAGTCTCTGATCGGCTCTAAGGCCGTTGCTGACAAGAAGCTCGCCACCGTTACTTTAACCGTCAAATCGTCCAAGGCGAAATCCAACCCCAGTCCGATTTGGAGCTCTGCTCCTACGCTATATTCGGGTGGGTCTTCCAGGCTGGATTCGGGTGGTTGGTCCATGGAGAGTTCACTGGGTAATGACGATGACGACGAGGATACGGGGTTTGATGAGCGAGCAGTGGGTAAGCAAAGGTTTGAGACGGTGGATTTTTCTGAGGGAGCTGCATTCAGGGAATTGGCGAGGGCGATTCTCAAGTTTGGGGAGATTTACGAGAGGATCGAAAGCTCCAAACAGCAGCAAATGATGGAATTGGAGAAGCAACGAATGGAGTTTACTAAGGATCTCGAATTTCAAAGAATGAATATGTTGATGGATACTCAATTAGAGCTCGAGAGAATGAAGCGGCCAAAGTATGGCAATACCTCAGAGAAGAATACATG 797 0.5119 MTRPSPSSNPRTANRSAGREDCWSEGATEILIEAWGDRYIQLNRGNLRQKDWKEVADAVNAREDGIKPHKTDIQCKNRIDTLKKKYKVEKSKSPPSKWVFYHRLESLIGSKAVADKKLATVTLTVKSSKAKSNPSPIWSSAPTLYSGGSSRLDSGGWSMESSLGNDDDDEDTGFDERAVGKQRFETVDFSEGAAFRELARAILKFGEIYERIESSKQQQMMELEKQRMEFTKDLEFQRMNMLMDTQLELERMKRPKYGNTSEKNT 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01371 265 MobiDBLite consensus disorder prediction 1 20 - -
Bva12g01371 265 MobiDBLite consensus disorder prediction 1 15 - -
Bva12g01371 265 Pfam Myb/SANT-like DNA-binding domain 20 107 IPR044822 -
Bva12g01371 265 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 9 261 IPR044823 -
Bva12g01371 265 Coils Coil 209 240 - -
Bva12g01371 265 PANTHER SEQUENCE-SPECIFIC DNA BINDING TRANSCRIPTION FACTOR 9 261 - -
Bva12g01371 265 Gene3D - 23 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01371 Bva-Chr12 12174632 12177332 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01371 192 261 Trihelix Transcription Factor Family AT3G14180 50.685 6.66e-17 78.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Bva12g01371 Myb_DNA-bind_4 8.5e-26 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01371 - - jre:108980016 323.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01719 12 14397282 14400076 Bva12g01371 12 12174632 12177332 ECH
Bva12g01371 12 12174632 12177332 Bva12g01371 12 12174632 12177332 ECH