Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01370 ATGGGAAGCTCTGTGCGTGTCAAAGAAGCTGTGATTGTGACCCCTTCTGAGCCAACCCCAGCTCGCGTCCTCGCTCTCTCTTCTCTGGATTCCCAGCTCTTCCTTCGCTTCACTATAGAGTACCTCTTCGTCTACGAGCCGTGCCCCTTCTTAGACCAGGGTGCCACCGCCGCTTGTTTGAAAGCAGCGTTAGCCAGAGCCTTAGTTCCATATTACCCATTTGCTGGCAGGGTCAGGTCTAGACCCGATGGCTCGTGCCTTGAAGTCCTCTGTCGAGCACAGGGTGCGCTTTTCGTCGAGGCCTTTTCTGATCATTACGCGATCAACGACTTTGGCAGGGCACCAAAAACTGTCACCCACTGGAGAAAACTCTTATCTCTCTGCGTGCCTGACGTTCTCAATGGCTCTCCGCCACTGGTGATTCAGCTCACATGGCTTAGAGACGGCGCCGCGGCGCTCGGCGTTGGGATCAACCATTGCATTTGCGATGGTATCGGCAGCGCCGagtttctcaattattttGCCGGCTTAGCTTCCGGCACCGATTTCAAACCAAAACCCGTTTGGGAACGTCACCTTCTCAATCCATCGCCGATGAAACACAATCGGGCTAGCTCAACCGTCCTCCCCGAGTTCAGCAGAGTCCCTGATCTCTGTAGATTCATGAGTCGCGTATGCAATGACCTTAAGCCCACCTCCATTACCTTCGATAAAATACGCCTCAACGAGCTCAAGAATCTAGCTAGTTTGACGAGTGGACCCAGTGAGTTGTCATCCTCGTCGTACACGTCATTCGAAGTGCTCGCTGGTCACGTGTGGAGGAGCTGGGCAAGAGCGTTGGGCTTCccttcaaatcaaattctGAAGTTGCTGTTCAGCGTCAACATACGGAACCGGGTCAAACCGGGCATACCCGACGGGTACTACGGAAATGCTTTCGTGCTGGGATGCGCCCAGACGAGCACGAAGGAGTTGACAGAGAAGGGTCTCGGGTATGCGACGGGTTTGGTTAAGAGGGCGAAAGAGAGAGCGAATAGTGAACACGTGACAAGGGTGATTGATTCAGTGTCGGAGTCGATGGCGTGTCCTGACTCAGTGGGGGTTCTGATAGTGTCGCAGTGGTCAAGACTGGGGCTAGAAAGTGTTGACTTTGGGATGGGGAAGCCCCTGCAGGTGGGGCCTGTTTGCTGCGATAGGTACTGTTTATTTTTGCCAGTGAAGGGCGAGAGGGAGGCGGCGAAGGTGATGGTGGCAGTCCCCACAGGTGCCGTTGACAAATACCACTATTTACTTTCAGCATA 1301 0.5304 MGSSVRVKEAVIVTPSEPTPARVLALSSLDSQLFLRFTIEYLFVYEPCPFLDQGATAACLKAALARALVPYYPFAGRVRSRPDGSCLEVLCRAQGALFVEAFSDHYAINDFGRAPKTVTHWRKLLSLCVPDVLNGSPPLVIQLTWLRDGAAALGVGINHCICDGIGSAEFLNYFAGLASGTDFKPKPVWERHLLNPSPMKHNRASSTVLPEFSRVPDLCRFMSRVCNDLKPTSITFDKIRLNELKNLASLTSGPSELSSSSYTSFEVLAGHVWRSWARALGFPSNQILKLLFSVNIRNRVKPGIPDGYYGNAFVLGCAQTSTKELTEKGLGYATGLVKRAKERANSEHVTRVIDSVSESMACPDSVGVLIVSQWSRLGLESVDFGMGKPLQVGPVCCDRYCLFLPVKGEREAAKVMVAVPTGAVDKYHYLLSA 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01370 433 Gene3D - 2 208 IPR023213 -
Bva12g01370 433 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 6 430 - -
Bva12g01370 433 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 6 430 - -
Bva12g01370 433 Pfam Transferase family 4 424 - -
Bva12g01370 433 Gene3D - 225 429 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01370 Bva-Chr12 12170939 12172548 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01370 5 394 Monolignol Biosynthesis Gene Families AT5G48930 28.986 2.38e-49 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01370 - - gmx:100817048 613.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01370 12 12170939 12172548 Bva12g01370 12 12170939 12172548 ECH