Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01369 ATGAACGACGACGTATCGTCAACCCCACCTTCTCACCCGCCCCAAGAAACCACCACCACCGCTTCCACCACCACTCCCTGTGAAACATCTAACAGCAGCAGCAGTAACAACAGTaacagcaacagcaacaaCCGCAAAGGCAAGGGTAAAGGTGGTCCTGACAACAACAAATTTAGATACCGTGGCGTGAGACAACGAAGCTGGGGCAAATGGGTCGCCGAGATCCGAGAGCCACGCAAGCGAACCCGCAAGTGGCTTGGCACTTTCGCCACAGCCGAGGACGCCGCCAAAGCCTACGACCGCGCCGCCATCATCCTCTACGGCTCTAGGGCTCAGCTTAACCTTCAACCTTCCGGTTCCTCCTCCAACAATTCGCGTagctcttcttcttcctctacgCAAACCCTTCGACCCTTGCTTCCTCGTCCCTCTGGTTTTGGTTTCACCTTCTCTTCCTCATCGTCCGCCGCCTACCCTCTCTCAGCGGCTTTGCCATCGTCGAGGGTTGTGCCCTGCAGTTTTTACAATTATAACCCTAGCGGCGGCGGGAGCATCAACACCGCACCCGTGGTGTGCCCTATTAATAACATCAACATAGTACAACACCATCATCATGTTCAACAAGTGGTGCAAGTACACCAACCGTACTATCAATCTCCAGATTCTAATCGGAAAAGTGTAGTACAAGGGCAAGGTAATATTATTCTTGACACCAGCGGAACAACCTCGTATCAGAACCACAATAGTCATCATCAACAGCTGCAACAGCAACAAAATCATTACGTTTCCGACCAACAGCAAAATCATGGGAATTGCATGTCCGATGAGATGAGCTCTTTGGTGGGTTCTGTGGATGCAAGCTTGTCATGTTCGCAGAGTGCTATTCTTGCTCCGGCAGCACTGGATCCGTCGGTGGCGGCGGCGGCTGCTGCACCGGGATCTCCACTCACGTGGCCATTGTTGACAAATGAGGAAGAGTATCCAACTAGTCTGTGGGACTATAGCGatcctttcttctttgatttcta 1028 0.4951 MNDDVSSTPPSHPPQETTTTASTTTPCETSNSSSSNNSNSNSNNRKGKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFATAEDAAKAYDRAAIILYGSRAQLNLQPSGSSSNNSRSSSSSSTQTLRPLLPRPSGFGFTFSSSSSAAYPLSAALPSSRVVPCSFYNYNPSGGGSINTAPVVCPINNINIVQHHHHVQQVVQVHQPYYQSPDSNRKSVVQGQGNIILDTSGTTSYQNHNSHHQQLQQQQNHYVSDQQQNHGNCMSDEMSSLVGSVDASLSCSQSAILAPAALDPSVAAAAAAPGSPLTWPLLTNEEEYPTSLWDYSDPFFFDF 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01369 342 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ABI4 11 340 - -
Bva12g01369 342 MobiDBLite consensus disorder prediction 1 62 - -
Bva12g01369 342 Pfam AP2 domain 59 107 IPR001471 GO:0003700|GO:0006355
Bva12g01369 342 SMART rav1_2 59 122 IPR001471 GO:0003700|GO:0006355
Bva12g01369 342 ProSiteProfiles AP2/ERF domain profile. 59 116 IPR001471 GO:0003700|GO:0006355
Bva12g01369 342 MobiDBLite consensus disorder prediction 115 138 - -
Bva12g01369 342 CDD AP2 59 116 IPR001471 GO:0003700|GO:0006355
Bva12g01369 342 PRINTS Ethylene responsive element binding protein signature 82 98 IPR001471 GO:0003700|GO:0006355
Bva12g01369 342 PRINTS Ethylene responsive element binding protein signature 60 71 IPR001471 GO:0003700|GO:0006355
Bva12g01369 342 MobiDBLite consensus disorder prediction 1 49 - -
Bva12g01369 342 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 11 340 - -
Bva12g01369 342 Gene3D AP2/ERF domain 58 116 IPR036955 GO:0003700|GO:0006355
Bva12g01369 342 SUPERFAMILY DNA-binding domain 59 116 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01369 Bva-Chr12 12164572 12165600 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01369 45 342 AP2-EREBP Transcription Factor Family AT2G40220 42.633 2.42e-43 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bva12g01369 AP2 1.8e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01369 K09286 - gmx:100301892 206.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01369 12 12164572 12165600 Bva12g01369 12 12164572 12165600 ECH