Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bva12g01368 | ATGTCGAGCCAAGACTCTCAGGCATTCAATTGGCACTACAATGAAATCGATGACCGGAACTTGCAAATCAAGGGCCGAACCCTCTTCTTCATCATTGTCCTTTTATCCGTTATCCTTCTTGTCACCCTTCTCTTCCTCTACGCTCGCTGGGTCTGCCGCTACCAGTACCACCTTCCCACCACCTTGGACATTAGCGACGCTCGCCACGCGCCGCCAGCAACACCACAGGGCCTGGACCCTGCTTCCATTAAGAAATTGCCCATAATTTTGCACCAAACGCCGTCGGATTCAAATTGCGCATTGGAGGATACAGAGTGCTGCATATGCCTCGGCGAGTTCAAAGATGGTGACAAATTGAAGGTTTTGCCTGGTTGTGACCATAGTTTTCATTCTGAGTGCGTTGATAAGTGGCTTATAAATCACTCTAGTTGCCCACTCTGCAGAGCTTCTCTGAAGCCCGATTCTTGTGCTTTTCCAAGGATTTTGATTCCAGAACCACCCATCAGAATCAACATCCAGTTCTa | 524 | 0.4866 | MSSQDSQAFNWHYNEIDDRNLQIKGRTLFFIIVLLSVILLVTLLFLYARWVCRYQYHLPTTLDISDARHAPPATPQGLDPASIKKLPIILHQTPSDSNCALEDTECCICLGEFKDGDKLKVLPGCDHSFHSECVDKWLINHSSCPLCRASLKPDSCAFPRILIPEPPIRINIQF | 174 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bva12g01368 | 174 | Pfam | Ring finger domain | 105 | 148 | IPR001841 | - | |
Bva12g01368 | 174 | SMART | ring_2 | 106 | 147 | IPR001841 | - | |
Bva12g01368 | 174 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 65 | 154 | IPR013083 | - | |
Bva12g01368 | 174 | PANTHER | RING-H2 FINGER PROTEIN ATL51-RELATED | 2 | 157 | IPR044675 | - | |
Bva12g01368 | 174 | ProSiteProfiles | Zinc finger RING-type profile. | 106 | 148 | IPR001841 | - | |
Bva12g01368 | 174 | PANTHER | RING-H2 FINGER PROTEIN ATL66 | 2 | 157 | - | - | |
Bva12g01368 | 174 | SUPERFAMILY | RING/U-box | 99 | 154 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bva12g01368 | Bva-Chr12 | 12159754 | 12160278 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bva12g01368 | 2 | 155 | C3H Transcription Factor Family | AT3G11110 | 44.586 | 3.86e-37 | 124 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bva12g01368 | - | - | gmx:100794927 | 235.343 |