Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01361 ATGGATGTCTCCGACGTCGAAGCAGTACTAGAATTCTTGAGGAAAAATGGGTTCTCCGAGGCAGAGTCTGCTCTCAAAGAGGACATCATTGAAAAGGGTGATCTGGGATCCTTTGACTATGAGAAGTTCTTCTTCCCAATGGTGCCACCTCCGCCTCCGGTTAGAACCCGATCGAGTGCCAGGTTGCCGGAGGGTCCCGCCGGCAGAGACTGCTCGAAATCGAGCTCTGAGTCGTCCGACGATGAGTTTCAAAGCTTGAAGTCATCTACTTCTGCTTCAGAATTCATCAATCCATATGGAATACGTTCGTCGTCTCAGACTCAGAATGATTCCGAATCTTCTTCTGATAGATTATCTCAATTTGGCACTGCGCGTGATTACCATGATTTTGACATGCAAAATGAACCATACTGGTATAATGAGAAAGATGATGACCAATTCATGACTCCTAATTTTGAAGGGCCGAATTTCTTTGGCAGTCAAAGCGAGGATAAATTTGTCATGACATCAGAAATGGAAAATCAGCACGAGAATTCTCAAGGTCTTAGTCACGGTTATGAAGGGTTTCAACTAGAGGAAAATGATGATTGCATGGATAAGTCATGTCTTTTCAATCATTCCTTAgctgatgatgaaaatgagaCTTACTTGAAAGAGTATAGTCATATGgataagaaagaccagaatgaAGGAGGTTTAAAGGAAAAAccagagaaaaaaattcttgctTACGGTTGTGAAGTCCCATTTTGCAAATGTTATGCAGGTACAGGAGAGTCTTGCAATGGGGATCCTGCAGACTACAGCTACCCCAGTATGAAAGATATTCCCGGTGATTTTCATTCAAAGGTTGTTGGTGATATTTCATCTTATGATTCTGCTTCACAGAAAAACATCAACCAAACTTTTGACTACCACACTAATAATGGCTACACTAAGGGGTTTAAAAGTTCCTATGACTTAACCCTCGTATTTCCTGAAACGAACCTACCAAATGGACTTGATAGCTATGAAGTTCGAGACACTGGAGACTTAACTGAAGAATGCCAAGAACCAGAGATTGCTCCAGATGGAGGGGATGCTACTGATGACGAGCTCCTAAAGTACACTCAAGAGGATGAATATGAATTGTTTGACTTAAGAATTATACATAGAAAGAACAGGACTGGATTTGAAGAAAGCAAGGAGATACCCATTGTGCCAAATACAGTCTTAGCTGACAGATACTATGTCACAGAATATCTTGGTTCGGCTGCCTTCAGTAAGGTTGTTCAAGCGCATGATCTTCACACTGGAATAGATGTTTGCTTgaagattataaaaaatgacaaagacTTTTTTGATCAAAGCTTGGATGaaatcaaacttttaaaatttgtcaacAAGCATGACCCAGCTGATGAGCGCCATATATTGCGTCTTTATGACTACTTCTATCATCGGGAGCATCTATTCATTGTAACCGAGCTTCTGCGAGCAAACTTGtatgaatttcaaaaattcaatCAAGAATCTGGTGGTGAAGCATATTTTACATTGAACAGGTTGCAGCTCATAACTCGTCAGTGTTTGGAGGCATTGCAATACTTGCATGACTTGGGAATCATTCACTGTGACCTGAAGCCGgaaaatattctaataaaaaattacaaaaaatgtgAGATAAAGGTTATTGATCTCGGCAGCAGTTGCTTTCAGACAGACAGTTTGTGCCTATATGTACAATCACGATCCTATAGGGCTCCTGAAGTGATGCTGGGCCTGCAATATGATGAAAAGATTGACATATGGTCTCTTGGCTGTATTTTGGCTGAGCTATGCTCTGGTGAAGTGCTCTTTCCAAATGAGGCAGTTGCGATGATTCTCGCACGCATGATTGGAATACTTGGTCCTATTGATCAGGAGATGTTGGTAAGGGGACAGGACACACACAAGTACTTCACCAaagaatatgatatttattatgtaaatgAGGATACAAATCAACTGGAGTACATAATTCCTGAGGAGTCATCATTGGAGCAGTATCTGCAAGTTGCTGATGCAATGTTTATCGATTTTGTCAGATACTTGCTTAGCATCAACCCCAAAAGACGGCCAACTGCAAGACGGGCGCTAAAGCATCCATGGCTCTCCCATGTTTATAACTCCAACTA 2156 0.3887 MDVSDVEAVLEFLRKNGFSEAESALKEDIIEKGDLGSFDYEKFFFPMVPPPPPVRTRSSARLPEGPAGRDCSKSSSESSDDEFQSLKSSTSASEFINPYGIRSSSQTQNDSESSSDRLSQFGTARDYHDFDMQNEPYWYNEKDDDQFMTPNFEGPNFFGSQSEDKFVMTSEMENQHENSQGLSHGYEGFQLEENDDCMDKSCLFNHSLADDENETYLKEYSHMDKKDQNEGGLKEKPEKKILAYGCEVPFCKCYAGTGESCNGDPADYSYPSMKDIPGDFHSKVVGDISSYDSASQKNINQTFDYHTNNGYTKGFKSSYDLTLVFPETNLPNGLDSYEVRDTGDLTEECQEPEIAPDGGDATDDELLKYTQEDEYELFDLRIIHRKNRTGFEESKEIPIVPNTVLADRYYVTEYLGSAAFSKVVQAHDLHTGIDVCLKIIKNDKDFFDQSLDEIKLLKFVNKHDPADERHILRLYDYFYHREHLFIVTELLRANLYEFQKFNQESGGEAYFTLNRLQLITRQCLEALQYLHDLGIIHCDLKPENILIKNYKKCEIKVIDLGSSCFQTDSLCLYVQSRSYRAPEVMLGLQYDEKIDIWSLGCILAELCSGEVLFPNEAVAMILARMIGILGPIDQEMLVRGQDTHKYFTKEYDIYYVNEDTNQLEYIIPEESSLEQYLQVADAMFIDFVRYLLSINPKRRPTARRALKHPWLSHVYNSN 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01361 718 Gene3D Transferase(Phosphotransferase) domain 1 463 711 - -
Bva12g01361 718 ProSitePatterns Serine/Threonine protein kinases active-site signature. 535 547 IPR008271 GO:0004672|GO:0006468
Bva12g01361 718 ProSiteProfiles Protein kinase domain profile. 409 711 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g01361 718 PANTHER HYPOTHETICAL SER-THR PROTEIN KINASE-RELATED 4 715 - -
Bva12g01361 718 Gene3D Phosphorylase Kinase; domain 1 404 490 - -
Bva12g01361 718 MobiDBLite consensus disorder prediction 78 119 - -
Bva12g01361 718 PANTHER DUAL SPECIFICITY PROTEIN KINASE 4 715 - -
Bva12g01361 718 CDD PKc_DYRK_like 409 711 - -
Bva12g01361 718 SUPERFAMILY Protein kinase-like (PK-like) 398 715 IPR011009 -
Bva12g01361 718 MobiDBLite consensus disorder prediction 49 119 - -
Bva12g01361 718 Pfam Protein kinase domain 411 711 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g01361 718 SMART serkin_6 409 711 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01361 Bva-Chr12 12105234 12109287 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01361 406 706 MAP Kinase Gene Family AT5G19010 31.464 2.45e-33 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Bva12g01361 Pkinase 9.4e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01361 - - gmx:100783988 1066.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01361 12 12105234 12109287 Bva12g01361 12 12105234 12109287 ECH