Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01359 ATGAAGAAATTACCTTCCCTCATGGTCGGTCTCGCCATCGTCGTTGTAATTCTCTTCTCTCTAATCATCTCATCCAATGCTCTCGGCTCCGGTGCCACCATCTCGATCAACGACGCCTCCGCCACCGTCTGCGGTATCGTAGCTGAGGAGCCAATAAAGCGCATTGAATGTTACCGTCGCGGGGACGTCATCGCCGTCCCTCCCAACATATCATTCTTGTCCATTTCTGGCGGGAGGGACTATTTCTGCGGCCTTAGGTCCGGTAACTACAGTTTACTTTGCTGGAACACAGTCTCTGCCAATGACAATTTTCAAAGCAAAAGACTTTATTCCAATGATACTGTTCTATTGGAGAATCTCGCACTTGGGGATAACCAAATTTGCGCGACGACCGTGGGTCCTGGTAATGTCATATGTTGGAGAACTGATGACAACTCCCTACCATCCCGGTCTTATCAATTTGCATCTATAACATCTGGGTCTGGTTTCTCTTGTGGAATTTTGAGGAATAGTTCTCAGGTTAAGTGTTGGGGATGGGGAAGCAGGAGTTCCAATGCGACTCGGATAGAAAATGAGTTTAGTAACATGACCATGGCGACTCTAGTAGCTGGTGATTCCCACGTTTGTGGGTTGAATCAAACTGGGTTTTTGGTATGTAAAGGGAGTAACGGATCCGGGCAACTCAATATTCCTCAGGGAGAGTCTCTGGAGTATACTGGTCTGGCACTGGGAGCAGAGCATACATGTGCAATTAGAAAATCGAATGGTACAGTGATTTGCTGGGGCGGTGGAGGACAATTCTCGCCTGATGTGATAGAAGGAGTTGCTTTTGAATTGATCGTTTCAGGTTCGAATTTTATTTGTGGATTGATAACAAGCAATTTTTCTGTTATGTGTTGGGGACCTGGCTGGCCTAATAGTTCAAGTTCTGTGCTTCCCTTGCCCCCTATTCTTCCAGGGCCATGTGTTCAATCTTGTGAGTGTGAAACATATGGTTTCTCTCAAAAATTTTGCTCTGGTTCTGGTAGCATTTGCAAGCCTTGTTGGCCTCAAATATCAGTGCCAGTGCCACCAGCATCGGTGCCGCCACCATCCCTTTCCCCTTCTCCTCCATCTTCTACATCAAGAGGATTGAGAAGGGGTTTACTGGCATTTGCCATTGTTGGATCTGTAGGAGTTTTTGCTGGGATTTGctcaataatttattgtttgtgGACTGGAGTTTGttttgggaaaaagaaaatccataaCTCTGTGCAACCCACAATAACTAGAGCTGCTAGTTCCAATAATGGGACCAATTCAAACAATAGTCCACCTTCGAGGTCATCTACCATTAGGCGCCAAGGCTCAAGAATAATGAGGCGCCAGAGAAGTGGACCCTCGTCAACAAAGCACCCAGATAGAGCGGAGGAGTTCACCTTGGCTGAGCTTGTAACAGTTACCAACAATTTCTCCATGGAGAACAAGATTGGTGCTGGAAGCTATGGTGTTGTGTACAGAGGCAAGCTTGCAGATGGTCGTGAAGTGGCGATTAAAAGGGGCGAAACGGGTTCAAAGTTGAAGAAGtttcaagagaaagaaagtgcCTTTGAGTCTGAATTGGCATTCCTGTCTCGTCTACACCACAAGCACTTGGTTAGACTAGTTGGGTTCTGTGAAGAGAAGGATGAGAGGCTTTTGGTGTATGAGTACATGAAGCATGGAGCATTATATGATCATCTGCATGGCAAGCACAATGTTGAAAAGAGTAGTGGTGTTTTGAATTCATGGCCAATGAGGATCAAAATCGCGCTAGATGCTTCGCGAGGAATCGATTATCTCCATAGTTATGCAGTTCCTCCTATAATCCACAGGGATATCAAGTCTTCTAACATTCTAATCGATGCAACATGGACAGCAAGAGTATCAGATTTTGGATTGTCATTGATGGGTCCAGAATCCGAGCACGACTACCGGCCAACCAAGGCAGTAGGAACAGTTGGATACATTGATCCTGAGTATTATGGTCTTAATGTATTGACAGCAAAGAGTGATGTTTATGGGCTGGGAATAGTGCTGCTAGAACTTCTGACCGGAAAGAGAGCTATATACAaggatgatgaaaatggaggTAGCCCAGTTAGTGTGGTGGACTTTGCAGTGCCTGCAATTCTGAGAGGAGAAATGGTCAGAGTTTTGGATCCAAGGGTTGGTCCACCAGCTTCAAATGAAGCAGAAGCAGTGGAGCTGGTAGCCTATACTGCTGTTCGTTGTGTGAATTTTGAAGGGAAGGAAAGACCAACAATGGCTGATATTGTATCTAATTTGGAGCGGGCTTTGGATTCTATTGATGTAAGTCATGGCAGCATTTCCAGTGGTAATATCTCTATTGTTTCAGAATG 2384 0.4417 MKKLPSLMVGLAIVVVILFSLIISSNALGSGATISINDASATVCGIVAEEPIKRIECYRRGDVIAVPPNISFLSISGGRDYFCGLRSGNYSLLCWNTVSANDNFQSKRLYSNDTVLLENLALGDNQICATTVGPGNVICWRTDDNSLPSRSYQFASITSGSGFSCGILRNSSQVKCWGWGSRSSNATRIENEFSNMTMATLVAGDSHVCGLNQTGFLVCKGSNGSGQLNIPQGESLEYTGLALGAEHTCAIRKSNGTVICWGGGGQFSPDVIEGVAFELIVSGSNFICGLITSNFSVMCWGPGWPNSSSSVLPLPPILPGPCVQSCECETYGFSQKFCSGSGSICKPCWPQISVPVPPASVPPPSLSPSPPSSTSRGLRRGLLAFAIVGSVGVFAGICSIIYCLWTGVCFGKKKIHNSVQPTITRAASSNNGTNSNNSPPSRSSTIRRQGSRIMRRQRSGPSSTKHPDRAEEFTLAELVTVTNNFSMENKIGAGSYGVVYRGKLADGREVAIKRGETGSKLKKFQEKESAFESELAFLSRLHHKHLVRLVGFCEEKDERLLVYEYMKHGALYDHLHGKHNVEKSSGVLNSWPMRIKIALDASRGIDYLHSYAVPPIIHRDIKSSNILIDATWTARVSDFGLSLMGPESEHDYRPTKAVGTVGYIDPEYYGLNVLTAKSDVYGLGIVLLELLTGKRAIYKDDENGGSPVSVVDFAVPAILRGEMVRVLDPRVGPPASNEAEAVELVAYTAVRCVNFEGKERPTMADIVSNLERALDSIDVSHGSISSGNISIVSE 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01359 794 SUPERFAMILY RCC1/BLIP-II 65 302 IPR009091 -
Bva12g01359 794 SMART serkin_6 485 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g01359 794 ProSiteProfiles Protein kinase domain profile. 485 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g01359 794 SUPERFAMILY Protein kinase-like (PK-like) 461 770 IPR011009 -
Bva12g01359 794 MobiDBLite consensus disorder prediction 425 448 - -
Bva12g01359 794 Gene3D - 26 195 IPR009091 -
Bva12g01359 794 Gene3D - 196 343 IPR009091 -
Bva12g01359 794 Pfam Protein kinase domain 486 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g01359 794 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 11 791 IPR044815 GO:0004674
Bva12g01359 794 ProSitePatterns Protein kinases ATP-binding region signature. 491 513 IPR017441 GO:0005524
Bva12g01359 794 PANTHER SERINE/THREONINE-KINASE CCR4-LIKE PROTEIN 11 791 - -
Bva12g01359 794 ProSitePatterns Serine/Threonine protein kinases active-site signature. 616 628 IPR008271 GO:0004672|GO:0006468
Bva12g01359 794 Gene3D Phosphorylase Kinase; domain 1 447 565 - -
Bva12g01359 794 CDD STKc_IRAK 491 772 - -
Bva12g01359 794 Gene3D Transferase(Phosphotransferase) domain 1 566 786 - -
Bva12g01359 794 MobiDBLite consensus disorder prediction 425 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01359 Bva-Chr12 12094332 12097111 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01359 1 794 Receptor kinase-like Gene Family AT3G55950 58.252 0.0 843
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Bva12g01359 Pkinase 2.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01359 - - gmx:100782916 1082.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01698 12 14244616 14247361 Bva12g01359 12 12094332 12097111 ECH
Bva12g01359 12 12094332 12097111 Bva12g01359 12 12094332 12097111 ECH