Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01350 ATGGCGACTTTGGTGACACTACTGATTGTGATCCTCCACACCGTGTTTTTTCTGTTCCTGCTCCGGAAATACCGGTACCGGAGGATGCGGTTGCCGCCGGGGAGCTTGGGGCTGCCGTTTATTGGGGAGACCTTGCAGCTTATCTCTGCCTACAAGACTGACAACCCGGAGCCTTTCATCGACCAGAGGGTGAGCCGGTACGGTCCAATATTCACGACCCATGTTTTTGGCGAGGCGACGGTGTTCTCCACTGACCCGGAGACGAACCGGTTCATTCTGCTGAACGAAGGGAAGCTGTTCGAGAGCAGCTACCCCCGATCGATACGTAACTTGTTGGGGAAGCACTCTTTGTTGTTCATGAAGGGTGCTCTTCACAAGAGGATGTATTCGCTCACCATGAGTTTTACTAACTGGTCCATCATCAAAGACCATCTCCTGGTTGATATAGACCGCCTCATCCGGCTCAACTTGGATTCCTGGACCGACCGGGTCCTTCTCATGGAGGAGGCCAAGAAGATAACTTATGAGCTAACAGTGAAGCAGCTGATGAGCTTCGATCCAGGCGAATGGACCGAGTCTCTGAGGAAAGAGTATGTTCTGGTGGTCGAAGGATTTTTCTCTCTACCCTTCCCTCTCCTTTCTACCACCTATCGCAGAGCCATTAAGACTAGAACAAAGGTGTTGGAAGCATTAACGTTGATAGTGAAGCAGAGGAGGAAAGAGAGCGAAGCcggagagaaaaagaatgacaTGTTGGAAGCACTGTTGGCCTCCGACGACGACGACTTCTCCGACGAACAAATAGCGGACATCTTGTTGGCTCTGCTGGTCGCCGGCTACGAAACCACCTCTACTATCATGACTCTTGCCGTCAAGTTCCTGACCGAGACTCCTCTAGCCTTGGCACAGCTCAAGGAAGAGCACGAACAAATCAGAGGAAGGAAGAGTGACGCAGAGGCAGGTTTGGATTGGAGTGATTACAAGTCAATGGCATTTACTCAATGTGTTGTTAATGAGACTTTGCGGATGGCAAACATCATTGGTGGGATATTTAGGAGAGCAGTGACAGACATCAATGTAAAAGGTTACACAATTCCTAAGGGGTGTAAGGTCTTTGCATCATTTCGTGCAGTGCATCTAAACCCTGACCATTTCAAAGATGCTCGCACCTTTAATCCGTGGAGATGGCAGAATAACTCAGAAGCAACAATCCCTGGTAATGTATATACACCGTTTGGAGGGGGGCCACGGCTTTGCCCTGGCTATGAGGTTGCTCGAGTTGTGCTTTCTGTCTTCCTTCACCATATGGTTACTGGTTTCAGCTGGATTCCTGCCGAGGAAGATAGGCTGGTGTTTTTCCCCACCACAAGAACTCAGAAGAGGTATCCTATCATAGTGAAGCGTAGAGATCAAGCCAAACCCTGTAAAGCAGAGCAATGTGTGCACAACATATA 1454 0.489 MATLVTLLIVILHTVFFLFLLRKYRYRRMRLPPGSLGLPFIGETLQLISAYKTDNPEPFIDQRVSRYGPIFTTHVFGEATVFSTDPETNRFILLNEGKLFESSYPRSIRNLLGKHSLLFMKGALHKRMYSLTMSFTNWSIIKDHLLVDIDRLIRLNLDSWTDRVLLMEEAKKITYELTVKQLMSFDPGEWTESLRKEYVLVVEGFFSLPFPLLSTTYRRAIKTRTKVLEALTLIVKQRRKESEAGEKKNDMLEALLASDDDDFSDEQIADILLALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEQIRGRKSDAEAGLDWSDYKSMAFTQCVVNETLRMANIIGGIFRRAVTDINVKGYTIPKGCKVFASFRAVHLNPDHFKDARTFNPWRWQNNSEATIPGNVYTPFGGGPRLCPGYEVARVVLSVFLHHMVTGFSWIPAEEDRLVFFPTTRTQKRYPIIVKRRDQAKPCKAEQCVHNI 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01350 484 PANTHER CYTOCHROME P450 90A1 7 468 - -
Bva12g01350 484 SUPERFAMILY Cytochrome P450 23 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva12g01350 484 Coils Coil 301 321 - -
Bva12g01350 484 PRINTS E-class P450 group I signature 267 284 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva12g01350 484 PRINTS E-class P450 group I signature 374 398 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva12g01350 484 PRINTS E-class P450 group I signature 419 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva12g01350 484 PRINTS E-class P450 group I signature 409 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva12g01350 484 PRINTS E-class P450 group I signature 334 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva12g01350 484 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva12g01350 484 PRINTS E-class P450 group I signature 287 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva12g01350 484 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 412 421 IPR017972 GO:0005506|GO:0016705
Bva12g01350 484 PANTHER CYTOCHROME P450 26 7 468 - -
Bva12g01350 484 Pfam Cytochrome P450 32 128 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva12g01350 484 Pfam Cytochrome P450 208 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva12g01350 484 Gene3D Cytochrome P450 22 469 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva12g01350 484 PRINTS P450 superfamily signature 410 419 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva12g01350 484 PRINTS P450 superfamily signature 335 346 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva12g01350 484 PRINTS P450 superfamily signature 278 295 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva12g01350 484 PRINTS P450 superfamily signature 419 430 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01350 Bva-Chr12 12047088 12051956 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01350 120 472 Cytochrome P450 AT5G05690 78.814 0.0 569
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01350 K09588 - gmx:100781291 757.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01350 12 12047088 12051956 Bva12g01350 12 12047088 12051956 ECH