Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01349 ATGGCCACCACTGCTGCTGCCACGTCATACTTCTTTGGCACCCGTCTCGGCAACGCAGCTTCAAACTCTGGAAAAGTCAAAGCATTATTCAACCTCGGCACCAAGAAGGCTCCGCCACCACCCAAGAAAACCAAAAGCCCACCGAGTCTAAAATCAGATTCGGATCGCCTTGTCTGGTTCCCGGGTGCCCAACCACCCGAATGGCTCGATGGAACCATGATCGGCGACCGTGGATTCGATCCCTTCGGCTTAGCAAAACCCGCCGAGTACTTGCAGTTCGATTTGGACTCGCTGGACCAGAATTTGGCCAAGAACGAGGCCGGACAAATTATCGGTACCAGGGTGGAGACCACGGAGATCAAATCGACGCCGTTCCAGCCATACACTGAAGTCTTCGGCTTGCAGAGGTTCCGCGAGTGCGAGGTCATTCACGGTAGGTGGGCAATGCTGGGAAGTCTCGGTGCCTTGGCCGTCGAGGCACTCACTGGCGTCTCGTGGCAGGACGCCGGAAAGGTGGAGCTTGTGGAAGGGTCGTCGTACCTGGGATTGACCCTTCCGTTCTCACTGACGCAATTGATCTGGATTGAGGTGCTATTGATAGGATACATTGAATTCCAAAGGAATTCAGAACTTGACCCAGAGAAAAGGTTATACCCAGGTGGCCAGTTCTTTGATCCTCTGGGTTTGACCAGTAAGAGCCCCGAAGAAACTAATAGACTTAAACTTGCAGAGGTTAAGCATTCTCGTTTAGCCATGGTCGCCTTCCTCATATTTGGAATCATAGCTGCTACCACTGGAAAGGGCCCTATTGCTTTTGTTTCCACCTTTAACAAATG 836 0.5215 MATTAAATSYFFGTRLGNAASNSGKVKALFNLGTKKAPPPPKKTKSPPSLKSDSDRLVWFPGAQPPEWLDGTMIGDRGFDPFGLAKPAEYLQFDLDSLDQNLAKNEAGQIIGTRVETTEIKSTPFQPYTEVFGLQRFRECEVIHGRWAMLGSLGALAVEALTGVSWQDAGKVELVEGSSYLGLTLPFSLTQLIWIEVLLIGYIEFQRNSELDPEKRLYPGGQFFDPLGLTSKSPEETNRLKLAEVKHSRLAMVAFLIFGIIAATTGKGPIAFVSTFNK 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01349 278 Pfam Chlorophyll A-B binding protein 65 260 IPR022796 -
Bva12g01349 278 MobiDBLite consensus disorder prediction 32 55 - -
Bva12g01349 278 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 2 278 IPR001344 GO:0009765|GO:0016020
Bva12g01349 278 SUPERFAMILY Chlorophyll a-b binding protein 52 274 - -
Bva12g01349 278 PANTHER CHLOROPHYLL A-B BINDING PROTEIN CP29.3, CHLOROPLASTIC 2 278 - -
Bva12g01349 278 Gene3D Chlorophyll a/b binding protein domain 58 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01349 Bva-Chr12 12040361 12041769 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01349 12 270 Chloroplast and Mitochondria Gene Families AT3G08940 68.462 8.34e-127 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01349 K08915 - zju:107413851 434.106