Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01341 ATGGAGTCGCGAGTGTTGTCACGCGCCACAACCTTATCCTCCATCCCCCACCTCCGCAAGCTTCCCAGGGATGCTACTAATGCTTCCTTCGTATCCGTCAAGACGATCGGGGCCGTTGGAGACGGCGGGAACCTCATTTGGGGGAGACAGCTCCGTCCGGCTCTGTTGATAGAGTCCTCGCCGGCGTTGAGGAAGGATGCTCTTAGGCGATGCCTCGCCGCCGCGTCCTCGTCTGCGGAGGGTGATTCCGCCGGGGAAAAGATTGCTCCGGTCGGGTTTTTCCAGAAGTACCCGGCCCTGGTAACtgggttcttcttcttcatgtgGTACTTCTTGAATGTGATTTTTAACATCCTCAACAAGAAGATCTACAATTACTTCCCCTACCCTTACTTTGTGTCGGTTATCCATTTACTCGTGGGGGTGGTGTACTGTTTGGTGAGCTGGGCCGTGGGCCTTCCCAAGCGCGCTCCAATAGACTCAAACTTGCTGAAGCTGCTGATTCCTGTGGCGGTGTGTCATGCACTAGGCCATGTTACCAGCAATGTCTCATTTGCAGCCGTTGCTGTTTCCTTCACACATACTGTTAAAgCTCTTGAGCCATTCTTCAATGCTGCTGCTTCACAATTCATTCTTGGCCAATCAATTCCCGTCACTTTGTGGCTATCACTGGCTCCTGTTGTTATCGGTGTGTCAATGGCATCCTTGACTGAGCTGTCGTTCAACTGGACTGGCTTTATAAGTGCCatgatttcaaatatttccTTCACATACCGAAGCATCTACTCGAAGAAAGCCATGACTGATATGGACAGTACCAATGTCTATGCCTACATTTCCATCATTGCTCTATTTGTCTGCATACCACCTGCCATAATTGTGGAGGGGCCTGCACTGCTCAAGCATGGTTTCAATGAAGCAATTGGTAAAGTAGGGTTGGTCAAGTTTGTCTCAGATCTCTTCTGGGTGGGAATGTTCTACCACCTTTACAATCAGGTGGCTACCAACACATTGGAGAGGGTGGCACCTCTTACCCATGCAGTTGGCAATGTACTAAAACGTGTATTTGTGATTGGGTTCTCAATTGTGATCTTCGGTAACAAGATTTCCACCCAAACTGGATGGAAGAAGAGAAACGACAAAAGAAAGCAGCATGAGAAGGAAGAGGCGTCAACTTGGAGGATGTCTTGCACTGTACAGGAAGAAAGGGTAAAGAAGGTTGCAGACATAAAATA 1235 0.4777 MESRVLSRATTLSSIPHLRKLPRDATNASFVSVKTIGAVGDGGNLIWGRQLRPALLIESSPALRKDALRRCLAAASSSAEGDSAGEKIAPVGFFQKYPALVTGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSNLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTVKALEPFFNAAASQFILGQSIPVTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNVYAYISIIALFVCIPPAIIVEGPALLKHGFNEAIGKVGLVKFVSDLFWVGMFYHLYNQVATNTLERVAPLTHAVGNVLKRVFVIGFSIVIFGNKISTQTGWKKRNDKRKQHEKEEASTWRMSCTVQEERVKKVADIK 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01341 411 PANTHER SOLUTE CARRIER FAMILY 35 25 374 - -
Bva12g01341 411 PANTHER BNAC02G47130D PROTEIN 25 374 - -
Bva12g01341 411 SUPERFAMILY Multidrug resistance efflux transporter EmrE 144 237 - -
Bva12g01341 411 Pfam Triose-phosphate Transporter family 101 373 IPR004853 -
Bva12g01341 411 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 100 373 IPR004696 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01341 Bva-Chr12 12009935 12013801 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01341 1 374 Antiporters AT5G46110 79.481 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01341 K15283 - rcu:8258423 653.284