Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01339 ATGCTTCCccttctcctcctcctcctcctcctctgcTTCCTCTTCTCACCGCCCACCATTCACTCCCTCAACCAAGAAGGTCTCTATCTCCACCAGTTCAAGCTCTCCATTGACGACCCCGACTCCGCCCTCTCCTCCTGGAACCAACGCGACAGCGTCCCCTGCAGCTGGGACGGCGTCAAATGCGACCCGACCACACTCTCCGTTACCCAACTTGACCTCTCCAACACAAACATCGCCGGTCCATTTCCCGCCTCCATTCTCTGCAACCTCGAAAACCTCACCTCCATTACCCTCTTCAATAACTCTATCAACTCCACCCTCCCTCTTGATGTTTCCCTCTGTCGCAGCCTCGTTCACCTCGACCTTTCCCAGAACCTCCTCACCGGTGCTCTCCCCCACACATTATCCGAGCTCCCCAATCTCAAGTACCTCGACTTAACAGGCAACAACTTCTCGGGTCAAATACCCGGTTCATTTGGCCGCTTCCAGAAGCTCGAGGTTCTTTCCCTGGTTTACAATCTACTGGATGAAACAATACCCGCTTCTCTTGGAAACATTACGACCCTGAAGATGCTTAACCTCTCTTACAACCCGTTCTTCCCGGGTCGGATCCCACCGGAGCTCGGGAACCTGACGAATCTCGAGGTACTGTGGCTGACTCAGTGTAACCTGGTTGGAGTGATACCTGACTCGCTTGGGAATCTCAAGAATCTGAAGGATTTGGACCTGGCATTGAACAATCTCTACGGGTCGATTCCGAGTTCTCTCACTGAGTTAACCAATGTGATTCAGATTGAGCTGTATAATAACTCGTTGTCCGGTGAGTTGCCTCCGGGAATGTCGAGACTCACTGCATTGAGGCTTCTCGACGCGTCTATGAACCATTTGACAGGGAAGATTCCTGACGAGTTGTGTCGGTTGCCGCTGGAGAGCCTCAACCTTTACGAGAATCGGTTCGAGGGAGAGTTACCGGAGAGCATTGCAAACTCGCCGAATCTCTATGAGCTAAGGTTGTTCGGAAACAGACTCACCGGGAAGTTGCCGAAAAATCTCGGCAAGAATTCGCCGTTGAGGTGGCTGGATGTCTCGAGCAATAACTTCTGGGGTGAAATTCCGGCGACATTGTGTGATCATGGGAAGTTGGAGGAGCTTCTGatgattttcaacaaattttctgGGGAGATCCCGGCGACCTTGGGCACGTGTCTGACTTTGACTAGGGTTCGACTCGGTTCTAACCGGCTTTCCGGCGAAATTCCGGCGGGTATTTGGGGACTCCCTCATGTTTATCTGCTTGAGCTTGTGGACAACTCATTCTCTGGTTCAATCGCGAGGACGATTGCCGGCGCCAGCAATCTGTCTCTGTTGATTTTATCGAGAAACAACTTCACGGGAACGATTCCCGATGAAATTGGATGGTTGGATAATCTTGTGGAATTTTCTGGGAATGATAATAACTTTAATGGGCCACTGCCTCAGAGTATTGTGAATCTTGGGCAGCTGGGTATTCTTAATCTTCACAACAATAAACTTTCTGGGGAGCTTCCGAAGGGGATTCGATCATGGAAGAAACTCAATGAGCTGAATTTGGCAAATAATGAGATTGGTGGTAGAATTCCTGACGAAATTGGTAGCTTGTCTGTTCTCAATTTCCTTGATCTTTCTTACAATCAGTTTTCTGGGAAACTTCCTCTGGGGTTGCAGAGTTTGAAGCTCAATCAGCTCAATTTGTCCTATAATCGTCTTTCTGGAGAACTTCCTCATCTGTTGTCTAAGGACATGTACAAGAATAGTTTTCTGGGTAATCCTGGTTTATGTGGGGATATAAAAGGTCTATGTGATGGCAGAAGTGAGGCTAAAGCTGCAGGTTATGTTTGGTTGCTGAGAGCTATCTTCATTGTTGCCACCTTGGTGTTTGTCGTTGGTGTTGTATGGTTCTATTTCAAGTATCGAAATTTCCAGAGAGCAAGAGCTATTGATAAGTCAAAATGGACATTGATGTCGTTCCATAAACTGGGATTTAGTGAAAATGAGATTTTGGACTGCCTTGATGAAGATAATGTGATAGGGACTGGATCATCTGGGAAAGTTTACAAGGTTGTACTTGGTAATGGGGAGATTGTTGCCGTAAAGAAGCTATGGAGTGGAATGAAGAAGGGAATAGATAGTGGGGATATTGAAAAGGGTCAGGTTCAAGACAGTGTTTTTGATGCTGAGGTTGAAACTTTGGGCAAAATTAGGCACAAGAACATTGTCAAGCTATGGTGTTGCTGCACCACAAGGGACTGCAAGCTCTTGGTTTATGAATACATGGCAAATGGTAGTCTTGGTGACTTGCTACATAGCAGTAAAGCAGGGTTGTTGGATTGGCCAACGAGGTATAAGATCGCTCTGGATGCAGCGGAAGGGTTATCTTATCTGCATCATGACTGTGTTCCCCCAATTGTTCATAGAGATGTGAAATCCAACAATATATTGTTGGATGGGGACTATGGTGCACGGGTTGCCGATTTTGGAGTAGCTAAGGTGGTCGAAGCCACTGGCAAGGGAACCAAATCCATGTCTGTCATAGCTGGGTCATGTGGATACATTGCACCAGAATATGCATACACGCTTAGAGTGAATGAGAAGAGCGACATATACAGTTTTGGCGTTGTCTTACTTGAGCTGGTTAGTGGGAAACGCCCTGTGGACCCCGAGTTCGGGGAAAAAGATTTGGTTAAATGGGTCTGCACCACGTTGGATCAGAAAGGCGTGGACCACATTCTTGACCCCAAACTTGATTCATGCTTCAAACAAGAAATCTGCAAAGTCCTAAATATTGGCCTCCATTGCACTAACCCTCTCCCGATCAACCGTCCCTCGATGAGAAGAGTGGTGAAGATGCTGCAAGAGGTTGGTCCAGACAACCAAACGAAGGCTGCCAAGAAAGATGGGAAATTGTCACCTTATTACTATGATGATGGCTCAGATCATGGAAGTGTAGCTTG 2993 0.4661 MLPLLLLLLLLCFLFSPPTIHSLNQEGLYLHQFKLSIDDPDSALSSWNQRDSVPCSWDGVKCDPTTLSVTQLDLSNTNIAGPFPASILCNLENLTSITLFNNSINSTLPLDVSLCRSLVHLDLSQNLLTGALPHTLSELPNLKYLDLTGNNFSGQIPGSFGRFQKLEVLSLVYNLLDETIPASLGNITTLKMLNLSYNPFFPGRIPPELGNLTNLEVLWLTQCNLVGVIPDSLGNLKNLKDLDLALNNLYGSIPSSLTELTNVIQIELYNNSLSGELPPGMSRLTALRLLDASMNHLTGKIPDELCRLPLESLNLYENRFEGELPESIANSPNLYELRLFGNRLTGKLPKNLGKNSPLRWLDVSSNNFWGEIPATLCDHGKLEELLMIFNKFSGEIPATLGTCLTLTRVRLGSNRLSGEIPAGIWGLPHVYLLELVDNSFSGSIARTIAGASNLSLLILSRNNFTGTIPDEIGWLDNLVEFSGNDNNFNGPLPQSIVNLGQLGILNLHNNKLSGELPKGIRSWKKLNELNLANNEIGGRIPDEIGSLSVLNFLDLSYNQFSGKLPLGLQSLKLNQLNLSYNRLSGELPHLLSKDMYKNSFLGNPGLCGDIKGLCDGRSEAKAAGYVWLLRAIFIVATLVFVVGVVWFYFKYRNFQRARAIDKSKWTLMSFHKLGFSENEILDCLDEDNVIGTGSSGKVYKVVLGNGEIVAVKKLWSGMKKGIDSGDIEKGQVQDSVFDAEVETLGKIRHKNIVKLWCCCTTRDCKLLVYEYMANGSLGDLLHSSKAGLLDWPTRYKIALDAAEGLSYLHHDCVPPIVHRDVKSNNILLDGDYGARVADFGVAKVVEATGKGTKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVLLELVSGKRPVDPEFGEKDLVKWVCTTLDQKGVDHILDPKLDSCFKQEICKVLNIGLHCTNPLPINRPSMRRVVKMLQEVGPDNQTKAAKKDGKLSPYYYDDGSDHGSVA 997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01339 997 Pfam Protein kinase domain 686 960 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g01339 997 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 6 977 - -
Bva12g01339 997 Pfam Leucine rich repeat N-terminal domain 24 63 IPR013210 -
Bva12g01339 997 ProSitePatterns Protein kinases ATP-binding region signature. 690 713 IPR017441 GO:0005524
Bva12g01339 997 PANTHER LRR RECEPTOR-LIKE KINASE 6 977 - -
Bva12g01339 997 SUPERFAMILY L domain-like 34 373 - -
Bva12g01339 997 ProSitePatterns Serine/Threonine protein kinases active-site signature. 816 828 IPR008271 GO:0004672|GO:0006468
Bva12g01339 997 Gene3D Phosphorylase Kinase; domain 1 668 771 - -
Bva12g01339 997 Gene3D Ribonuclease Inhibitor 22 174 IPR032675 -
Bva12g01339 997 Pfam Leucine Rich Repeat 214 236 IPR001611 GO:0005515
Bva12g01339 997 SMART LRR_typ_2 284 308 IPR003591 -
Bva12g01339 997 SMART LRR_typ_2 163 187 IPR003591 -
Bva12g01339 997 SMART LRR_typ_2 139 162 IPR003591 -
Bva12g01339 997 SMART LRR_typ_2 499 523 IPR003591 -
Bva12g01339 997 SMART LRR_typ_2 212 235 IPR003591 -
Bva12g01339 997 SMART LRR_typ_2 236 260 IPR003591 -
Bva12g01339 997 SMART LRR_typ_2 91 115 IPR003591 -
Bva12g01339 997 Gene3D Transferase(Phosphotransferase) domain 1 772 989 - -
Bva12g01339 997 Gene3D Ribonuclease Inhibitor 248 314 IPR032675 -
Bva12g01339 997 Gene3D Ribonuclease Inhibitor 175 247 IPR032675 -
Bva12g01339 997 MobiDBLite consensus disorder prediction 972 986 - -
Bva12g01339 997 SMART serkin_6 684 986 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g01339 997 SUPERFAMILY L domain-like 310 607 - -
Bva12g01339 997 Gene3D Ribonuclease Inhibitor 315 616 IPR032675 -
Bva12g01339 997 MobiDBLite consensus disorder prediction 968 997 - -
Bva12g01339 997 Pfam Leucine rich repeat 93 152 IPR001611 GO:0005515
Bva12g01339 997 SUPERFAMILY Protein kinase-like (PK-like) 678 965 IPR011009 -
Bva12g01339 997 ProSiteProfiles Protein kinase domain profile. 684 967 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01339 Bva-Chr12 11992410 11996220 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01339 18 997 Receptor kinase-like Gene Family AT1G28440 72.644 0.0 1466
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bva12g01339 Pkinase 1.1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01339 - - gmx:100819887 1634.39