Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01336 atgaagcaCGGTGAGCTTattgtttatgatttaatCATGGTTGGTTTATCTGTATTTCTCATCGTTCTGGGTATTGTCTTGTTTCTTGTTTGCAAGAAGAAACCTGTTGAATCTGAAGAAACACTCCCTGTGAAGCTTTGTGCTCGTGCATTCCCTTTAACAGATATCGATACTGCCACTGATGGCTTCAATCAGAGGAGAATTGTGGGTAAGGGTCGCCTAGGAACTGTATATGCAGGGGTGCTGGAAAAAGGAGAACTTGTAGCAGTTAAGAGGATCAATCCCCTCTTTGTTCTGAGCAATGCAGGATTTGGATTCTCATCAATTCTGAAATGGCTCTCCCTAGCTCAGCACCCTAATATAGTTCCCATTATTGGGTATTCAGAAGCCCCGGGAGAGAGGATTATACTAATGGAGTTTATGGGGATGGTGAGCTTAGACTTCTATTTGCATCAAAACCCAGAAGGGGCTTCGCTTTTGGATTGGAACCAAAGGCTCAGGATTGCAGCAGGAGCAGCTAGAGGGCTTGAGTATCTGCATGAAGTTGTGGCACCAAATATTGTTCATGGGTGTGTCAAGTCCTCAAATATTCTAATTGATGTGAATTTCTGTGCTAGGATTTCTGATTATGGGCTTAATTTTTTGGCACCCAAAGAGAAGAGAGGCCTAGTGGGGTATGTGGATGATGAGCATTGGAATCACagaggtggtggtggtgcttgCAAGGAAAGTGATGTTTATGGATTTGGGATGGTGTTGTTGGAGCTGTTAAGTGGAAGAGGGTGTGAAGAAGGGTTATTAGCAAAGTGGGCATTGCCTTTGATTAAGGAAATGAGGTATAGTGAATTTTTGGATCCAAGATTGGTTATTCCTTCTGAAATGAATCCTCTTGTCAGATTAGCAAAAGTTGCTTCAGCTTGTGTTGGCAATCCAAGAAAATGCAGGCCATCCATTGTTCAAGTGGTGGCCATTTTGAACAACTTAGAGATGGAAGTATGCCTTTG 1004 0.4104 MKHGELIVYDLIMVGLSVFLIVLGIVLFLVCKKKPVESEETLPVKLCARAFPLTDIDTATDGFNQRRIVGKGRLGTVYAGVLEKGELVAVKRINPLFVLSNAGFGFSSILKWLSLAQHPNIVPIIGYSEAPGERIILMEFMGMVSLDFYLHQNPEGASLLDWNQRLRIAAGAARGLEYLHEVVAPNIVHGCVKSSNILIDVNFCARISDYGLNFLAPKEKRGLVGYVDDEHWNHRGGGGACKESDVYGFGMVLLELLSGRGCEEGLLAKWALPLIKEMRYSEFLDPRLVIPSEMNPLVRLAKVASACVGNPRKCRPSIVQVVAILNNLEMEVCL 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01336 334 ProSiteProfiles Protein kinase domain profile. 63 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g01336 334 Pfam Protein tyrosine and serine/threonine kinase 66 324 IPR001245 GO:0004672|GO:0006468
Bva12g01336 334 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 1 333 - -
Bva12g01336 334 SUPERFAMILY Protein kinase-like (PK-like) 40 325 IPR011009 -
Bva12g01336 334 Gene3D Transferase(Phosphotransferase) domain 1 141 332 - -
Bva12g01336 334 Gene3D Phosphorylase Kinase; domain 1 29 140 - -
Bva12g01336 334 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 1 333 - -
Bva12g01336 334 PIRSF ILK 31 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01336 Bva-Chr12 11979682 11981321 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01336 48 325 Receptor kinase-like Gene Family AT3G59420 40.956 9.87e-56 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Bva12g01336 PK_Tyr_Ser-Thr 1.6e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01336 - - vun:114187437 548.125