Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01335 ATGACATGGTGCAATGACTCAGACGAGGAAAGGGCCATTGAAATAATCACGCCCACTGCAACTCCTAGAGCTTCTAGCACTGCTCTCAATGATCCAAAGATCAATCAAATTCGAACCATAACTTGCCCTTCATGCGGCCATAACATACAGTGCCAAGAACAGACTGGGATTCATGACTTGCCAGGGCTACCTGCTGGGGTGAAGTTTGATCCAAATGACCAAGAGATTCTAGAGCATTTGGAGGCGAAGGTTCTGTCTGATGTGCAAAAGCTGCATCCTCTTATTGATGAATTCATCCCAACTCTTGAAGGGGAGAATGGGATCTGTTACACACACCCAGAAAAGCTGCCAgGAGTAAACAAAGATGGACAAATCCGCCACTTCTTTCATAGGCCTTCAAAAGCATACACAACCGGTACAAGGAAACGCAGAAAGGTTCACACTGATGAAGAAGGAAGCGAAACAAGATGGCACAAAACAGGAAAAACTAGGCCAGTTTACGTTGGCGGCGGAGTGAAGGGTTTCAAAAAGATACTAGTCCTCTACACCAACTATGGCAGGCAAAGGAAGCCTGAGAAGACAAATTGGGTGATGCATCAATACCATCTTGGCAGCAGTGAAGACGAGAAAGATGGAGAGTTAGTGGTTTCCAAGGTATTCTTCCAGACACAACCTAGACAATCTAATTCAATCATCAAGGATCCTTGTGAGAAAATATCGAATAATGTTGTCATCCGAAACGAGcacgatgatgatgatgagagTGCAATGGCCAGAAATGCAACAGCTCTTATGGACTATTACACTTCCccttatataaattatgatcATATGGGTCATATTAATGGAGAAATCTCACCCCTACTTATTCCTAACTTGGTTGCCCAAGCTGATGGCTCTTCTGCTTTCATTCGCTTAGCAATGGATCATGCAACCAAATTAAGGAAGACTTG 953 0.4229 MTWCNDSDEERAIEIITPTATPRASSTALNDPKINQIRTITCPSCGHNIQCQEQTGIHDLPGLPAGVKFDPNDQEILEHLEAKVLSDVQKLHPLIDEFIPTLEGENGICYTHPEKLPGVNKDGQIRHFFHRPSKAYTTGTRKRRKVHTDEEGSETRWHKTGKTRPVYVGGGVKGFKKILVLYTNYGRQRKPEKTNWVMHQYHLGSSEDEKDGELVVSKVFFQTQPRQSNSIIKDPCEKISNNVVIRNEHDDDDESAMARNATALMDYYTSPYINYDHMGHINGEISPLLIPNLVAQADGSSAFIRLAMDHATKLRKT 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01335 317 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 1 301 IPR044799 GO:0003700
Bva12g01335 317 Gene3D NAC domain 72 226 IPR036093 GO:0003677|GO:0006355
Bva12g01335 317 MobiDBLite consensus disorder prediction 136 157 - -
Bva12g01335 317 MobiDBLite consensus disorder prediction 142 157 - -
Bva12g01335 317 Pfam No apical meristem (NAM) protein 64 203 IPR003441 GO:0003677|GO:0006355
Bva12g01335 317 ProSiteProfiles NAC domain profile. 63 222 IPR003441 GO:0003677|GO:0006355
Bva12g01335 317 PANTHER NAC DOMAIN-CONTAINING PROTEIN 10 1 301 - -
Bva12g01335 317 SUPERFAMILY NAC domain 58 222 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01335 Bva-Chr12 11972210 11974977 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01335 1 232 NAC Transcription Factor Family AT4G28500 71.674 1.71e-123 354
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva12g01335 NAM 1.6e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01335 - - gmx:100795920 462.611