Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01334 ATGGCAAGGTGCAATGGCAGTAGTGATGGCCGTGGGTGTGCTGCTTGCAATTACCACAGGAAAAGCTGCGAGGAGGATTGTATCCTCGCTGCTTACTTCCCATTAGAAAAAGCTAAAGGGTATGAAGCAGTTAATCAACTACATGGCTTCAGCATATTGAGtgagaaattgaagaaatttgattcAGAAAGTGATAGAAAAGAATTTGTCAAGTCTGTTATATGGGATGCCCTCAATGTAGATGGATGTGGACCAACACTCACCTA 266 0.4023 MARCNGSSDGRGCAACNYHRKSCEEDCILAAYFPLEKAKGYEAVNQLHGFSILSEKLKKFDSESDRKEFVKSVIWDALNVDGCGPTLT 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01334 88 ProSiteProfiles LOB domain profile. 11 88 IPR004883 -
Bva12g01334 88 Pfam Lateral organ boundaries (LOB) domain 13 77 IPR004883 -
Bva12g01334 88 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 10 78 - -
Bva12g01334 88 PANTHER LOB DOMAIN-CONTAINING PROTEIN 2 10 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01334 Bva-Chr12 11967979 11968245 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01334 11 78 AS2 family AT1G06280 38.235 1.31e-12 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Bva12g01334 LOB 2.1e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01334 - - lang:109327917 71.2478