Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01331 ATGGGGGGTTTGATCGATCTTAACACTACAGAGGACGATGAAACGCCATCATCTGGTtcctctgcttcttcttcctcgAACTCTGGTTTAAGTACTTCTGTTTCGGCATCTGCTTTGGCCgttgcttcttcttctgtgTGCTTGGAGTTATGGCATGCGTGTGCGGGCCCAATGATCTCGTCGCCGAAGAAAGGGAGTGTGGTGGTGTATTACCCACAAGGACACTTTGAGCAGGTTCAGGGCTTTTCGGTCACTGCCTATAATATCCCAACCCATGTGTTCTGTCGCGTTGTTGATGTCAAGCTCCATGCTGAGGAAGGGAGTGATGAAGTATATTGCCAGGTTACCTTGGTTCCTGAAAGTGAGCACGTTGAACGAAAATTGCGAAAAGGATCAGTTGATGCAGACGGTGAAGAGGAGGATGCAGAAGACATGGTGAAGTCAACAACACCACACATGTTCTGCAAGACTCTTACAGCTTCTGATACCAGTACACATGGTGGGTTCTCTGTCCCTCGTCGAGCAGCAGAAGATTGTTTCCCTCCCCTGGATTACAGTCTGCAGAGACCTTCACAGGAGCTTGTGGCTAAGGATCTGCACGGACTTGAATGGAAGTTCCGACACATCTACAGAGGCCAGCCACGCAGGCATTTGCTCACAACAGGATGGAGTGCATTTGTAAACAAGAAGAAGCTTGTGTCTGGAGATGCTGTCCTCTTCCTTAGgGGAGAGGATGGGGAGCTGAGATTGGGAATTCGAAGGGCAGTTCAGTTGAAAGGTGGTGGCACCTTTTCAACTCCCACTGGACAGCAATTGAATCCCAGCACTCTCATAGATGTGGTTAATGCTCTTAATGTCAGATGTGCTTTTAGTGTTTGCTATAACCCAagGGCCAGCTCATCGGACTTCATAATACCTCTCCACAAATTCTTGAAGAGCCTTGATCATTCCTATTCAGTTGGAATGAGGTTCAGGATGCGTTTTGAATCTGAAGATCCTGGAGAGCGAGGGTGCAATGGGTTAATTGTTGGAATTAGTGATGTGGATCCTGTTAGGTGGCCTGGATCAAAATGGAGATGCTTAATGGTACGATGGGACGACATGGAAGGCAGTAGGCATAATAGAGTGTCTCCTTGGGAAATTGAACCAACTGGTTCTGCTTCCACTTCCAGTAATTTGATGGTAACAGGTTTGAAGAGGACCAGAATTGGACTGCCATCAGCAAAGCTAGAATTTCCTGTTCCCAATGGAATTGGAACATCAGACTATGGGGAATCTTTGAGGTTCCGGAAGGTCTTGCAAGGTTCAAATTGTTCTGGGATTGCTGCACCAGTAAATGGCATGAGATTCCCCAGAGTGAATTCTGACAATGGCATAGACGTTAGTGAATCTTTCCAGATGCAGGTCTTGCAAGGTCAAGAAATACTTCCAAGCCAACCATACGGAAGAGTTTTGTCCGTTGATGAGGCTCAAGGAAATGGTCGCTGTGGAATTTTTGATGGTTTTCAGTTGCTGGGCCCCAGAAATAGATGGTCTGCCCAAATGCAGGATAGTGCTGCTCTTTTGCACCCTCCTGCTCCATCTGGGCAAGTGTCATCTCCATCATCTGTGTTGATGTTCCAGCAAGCTGTCAGTCCAGCTTCAAACTGTGactctatatataatatcaatggTACTCAGAATATGGGAGGCAAAACCCATTTTCAAGGTTCACACACTTCTGAAGTTAATTGTAGCAAATTCACATTGTCCCCTCGTTACGAGCCTACCTTTGGTGGGAATGTTAAGGAAGGAATAAACTCTTTTGGGATGTTAAATTTGCACAATCATGTTGGTGCTTCAGAGTCTCATGATTCTGTGTCTCCATTGAGAGGCAGTGAAGAGTTGGTGTCTTCCTGTAAAAGTAGCTGCAGACTCTTTGGCTTTTCATTAACTGAGGAAAGTCATGATGCAAACAGGGATACTGACCCTATTACGATCACTCATGAATTGAATTCTGGAGCTTCCTTTACAAGACATGTTGGAGATAAGTTCCATCCAGAGTCCTCCCTGAGGGGCAAGGCAGTTGGAAGCAACTATGTCAAGGGTGTACTGCAGTTTTG 2102 0.4491 MGGLIDLNTTEDDETPSSGSSASSSSNSGLSTSVSASALAVASSSVCLELWHACAGPMISSPKKGSVVVYYPQGHFEQVQGFSVTAYNIPTHVFCRVVDVKLHAEEGSDEVYCQVTLVPESEHVERKLRKGSVDADGEEEDAEDMVKSTTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSLQRPSQELVAKDLHGLEWKFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGELRLGIRRAVQLKGGGTFSTPTGQQLNPSTLIDVVNALNVRCAFSVCYNPRASSSDFIIPLHKFLKSLDHSYSVGMRFRMRFESEDPGERGCNGLIVGISDVDPVRWPGSKWRCLMVRWDDMEGSRHNRVSPWEIEPTGSASTSSNLMVTGLKRTRIGLPSAKLEFPVPNGIGTSDYGESLRFRKVLQGSNCSGIAAPVNGMRFPRVNSDNGIDVSESFQMQVLQGQEILPSQPYGRVLSVDEAQGNGRCGIFDGFQLLGPRNRWSAQMQDSAALLHPPAPSGQVSSPSSVLMFQQAVSPASNCDSIYNINGTQNMGGKTHFQGSHTSEVNCSKFTLSPRYEPTFGGNVKEGINSFGMLNLHNHVGASESHDSVSPLRGSEELVSSCKSSCRLFGFSLTEESHDANRDTDPITITHELNSGASFTRHVGDKFHPESSLRGKAVGSNYVKGVLQF 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01331 700 Gene3D - 152 256 IPR015300 -
Bva12g01331 700 PANTHER AUXIN RESPONSE FACTOR 37 446 - -
Bva12g01331 700 SMART B3_2 154 256 IPR003340 GO:0003677
Bva12g01331 700 Pfam B3 DNA binding domain 154 255 IPR003340 GO:0003677
Bva12g01331 700 Gene3D - 317 391 - -
Bva12g01331 700 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 37 446 IPR044835 GO:0003677|GO:0006355|GO:0009725
Bva12g01331 700 Pfam Auxin response factor 281 361 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Bva12g01331 700 ProSiteProfiles B3 DNA-binding domain profile. 154 256 IPR003340 GO:0003677
Bva12g01331 700 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 456 700 IPR044835 GO:0003677|GO:0006355|GO:0009725
Bva12g01331 700 PANTHER AUXIN RESPONSE FACTOR 456 700 - -
Bva12g01331 700 MobiDBLite consensus disorder prediction 10 29 - -
Bva12g01331 700 CDD B3_DNA 152 254 IPR003340 GO:0003677
Bva12g01331 700 MobiDBLite consensus disorder prediction 1 29 - -
Bva12g01331 700 SUPERFAMILY DNA-binding pseudobarrel domain 147 262 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01331 Bva-Chr12 11946259 11952063 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01331 153 502 B3 DNA Binding Superfamily AT2G33860 57.766 1.93e-139 414
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Bva12g01331 B3 4e-22 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01331 K14486 - gmx:100789906 961.059