Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01328 ATGTTCCACTCTGTTCCTTCAGCAGATGCTACCCTTCTTAAGTTGGTTTTCCATAATTATAGTGATGAAGAGCGCATAAAGCTATTGAAGAATTGCAAAGAAGCGATTTCAAGCAAaggcaaagaaggaaaagtgATTATCATAGATATGGTGataaatgaaaaggaagataAACCTGAATTGACAGAAGCAAAACTGTTATATGATTTGTTAATGATGTCTCTGCTCactggaaaagaaagagaggaaaaggaaTGGGAGAAGCTCTTTCTTGAAGCTGGATTCAGTCACTACAAGATAACAACCATCTTGGTCTG 317 0.2997 MFHSVPSADATLLKLVFHNYSDEERIKLLKNCKEAISSKGKEGKVIIIDMVINEKEDKPELTEAKLLYDLLMMSLLTGKEREEKEWEKLFLEAGFSHYKITTILV 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01328 105 Pfam O-methyltransferase domain 1 96 IPR001077 GO:0008171
Bva12g01328 105 PANTHER ASMT2 1 103 - -
Bva12g01328 105 PANTHER O-METHYLTRANSFERASE 1 103 IPR016461 GO:0008168
Bva12g01328 105 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 105 IPR016461 GO:0008168
Bva12g01328 105 Gene3D Vaccinia Virus protein VP39 1 104 IPR029063 -
Bva12g01328 105 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 102 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01328 Bva-Chr12 11933350 11933821 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01328 1 100 Monolignol Biosynthesis Gene Families AT1G51990 40.196 3.66e-17 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01328 K22588 - qsu:112018723 149.058