Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01327 ATGTTTCAGTCCATCCCTCATGCCGATGCAGTTCTATTGAAGTGTATTTTGCATGATTGGAATGATGaacaattcataaaaatcCTGAAGAACTGCAAAGAAGCTATTGAGGGTAAAGGCATAACAGGGAAGGTGATTGTCATAGAAATGGTGACAGATGTGAAAAACGATGACCCTGAATTGGCTGAGTTGAATATGATGGTTAAGTACAGcgggaaaaaaagaagtgaaaaggAATGGGCAGAACTCTTCTCAGAGACAGATGCCATCCTTCTTAAGTTGGTTCTCCACGCTTATAATGATGAAGACTGCATAAAGGTGCTGAAGAAGTGCAGAGAAGCGATTTCAAGCAAaggcaaagaaggaaaagtgATAATCATAGATATAGTGATAAATGAAAAGCAGGATAAACATGAATTGACAGATGCAAAGCTGTTTTATGATGTGTTGATGATGTCTGTGGTCActggaaaagagagagaggaaaaggaaTGGGAGAGTCTCTTCTTGGAAGCTGGATTCAGTCACTACAAGATAACACCCATCTTTGGTTTAAGGTCCCTTATTGAAGTTTATCCTTA 581 0.3373 MFQSIPHADAVLLKCILHDWNDEQFIKILKNCKEAIEGKGITGKVIVIEMVTDVKNDDPELAELNMMVKYSGKKRSEKEWAELFSETDAILLKLVLHAYNDEDCIKVLKKCREAISSKGKEGKVIIIDIVINEKQDKHELTDAKLFYDVLMMSVVTGKEREEKEWESLFLEAGFSHYKITPIFGLRSLIEVYP 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01327 193 Pfam O-methyltransferase domain 1 86 IPR001077 GO:0008171
Bva12g01327 193 Gene3D Vaccinia Virus protein VP39 88 193 IPR029063 -
Bva12g01327 193 Gene3D Vaccinia Virus protein VP39 1 87 IPR029063 -
Bva12g01327 193 PANTHER O-METHYLTRANSFERASE 1 86 - -
Bva12g01327 193 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 86 IPR029063 -
Bva12g01327 193 PANTHER O-METHYLTRANSFERASE 86 193 - -
Bva12g01327 193 PANTHER O-METHYLTRANSFERASE 86 193 IPR016461 GO:0008168
Bva12g01327 193 PANTHER O-METHYLTRANSFERASE 1 86 IPR016461 GO:0008168
Bva12g01327 193 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 193 IPR016461 GO:0008168
Bva12g01327 193 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 88 192 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01327 Bva-Chr12 11921486 11924233 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01327 88 193 Monolignol Biosynthesis Gene Families AT1G51990 40.000 7.83e-16 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01327 K22588 - qsu:112018723 182.956