Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01319 ATGGATCGAGAAAGGAAATTGTTTCTGCTAATAATACTTCTATTTCAAGTTCTGCTTGTAGCAGCACAGACCTCCAATATCGATGACTTTAAAGGTCTAACAGGTCTCACTGAAAACTGGAACCAAAAACCTCCAAATTGGGTGGGTTCAGATCCTTGTGGCAGTAACTGGGAAGGAATTCGTTGCGAAAATTCAAGAATTATCTCAATaaaattatcAAGCATGAAATTGTCGGGCACGCTGTCTTCAGAAATCCAGTCAATATCtgaattagaaattttGGATCTTTCTTTCAACATGGGCTTCACAGGAAGAATTCCAGATGAAATTGGAAATCTGAAAAATCTAAATACCCTAATATTGGTCGGTTGTAGATTCTTCGGCATCATTCCCGCTTCAATAGGAAATCTAAAGCAGCTGACTTTTCTAGCTCTGAATGCTAATCAGTTTAGTGGAGAGATTCCAAGTACAATTGGTAATCTATCCAACATTCAATGGCTAGATCTTTCTGATAACCAACTCCAAGGAAGTATCCCTGTCTCTGATGATAATGGACCTGGTCTTGATTTGCTACATACTGCAAAACACTTTCATTTCGGAAACAATAGACTCTCGGGTCCAGTTCCAGCTAAACTTTTCAGCTCAAACATGAACCTTATCCATGTGATTTTTGACAACAATAGACTGAATGGCAGCATTCCTAGTTCCCTTGGACTTGTGACATCTTTGGAGGTGGTGCGTTTTGATAGAAATCAAATGATTGGACAAGTGCCTAACATCAGTACTCTGGGAAAACTTACTGAGCTGTATTTATCGAACAATAATCTGAATGGCTCTCTGCCTGATCTTAGCGGACTAAGTCTCATCTATGTGGATTTGAGCAACAATAGTTTTAATGCTTCTGAAATTCCTCCTTGGGCTTCAACTTTGCAGTATATGACAACATTAAATTTAGGAAACACCCGTCTCCAAGGCAACATACCTGTCTCATTGTTCTCCCTGCCTAATTTAGAGTCCGTGGTTCTGAGGGACAACCAACTCACTGGCGACTTGGACATTGGCAGTTCCTACAGTAGCAATCTGCAAACCGTTGATGTGGAGGATAATCAAATAAGTGACTTCAGTCAGACAAACTCACAAATCAGTAAAGCAGTACTACTATTTGGCAACCCAATTTGTCTTGAAACCGGAGCTCGTGCACAAAGTTACTGCCAAGAAAGGCAATCCAATTTATCGTATTCAACGTCACCAAATAATTGTTCTCCTCTTCTTTGTATTTCCAATAAGCTTTCCAGCCCCAACTGTAAATGTGCATATCCATATACTGGAACTCTTATTTCCAGAGCTCTTAGTATCTCAAACTTTGCCAACAAAAGTTATTATGTGGAAATTGAGCAGACTCTGATGAGTACTTTTCGATCCCAAAATCTTCCAGTCGATTCAGTTTCTCTGAGTAATCCCTTCAAGAATTCTTCCACTGACTATTTTCAATTGACCATTTATGATGCCCCAGAATTTTTTAGTCCTTACTTCTTCATTGGTGATGACTATCAGTACTATGCAGGAGAAccttcaaaaaattcaacaaatgcTGGGGTTATAGCTGGTGCAGTAGCTGGTGTATTTGTCTTTTTGGTGATAGCTGTTCTTGCTGGGATATACGCCTTCcgccaaaagaaaagagcacAAACAGCAATGGACAGGAACCCTTTTGTAAACTGGGAACAGAACAAGGATAGTGGCGCTGCTCCTCAGTTGAAAGGAGCAAGATGGTTCTCATTTGAAGAGCTAAAGAAATACACCAACAATTTCTCAGATGCAAATAATATTGGATCTGGGGGCTATGGAAAGGTTTACCGAGGTGTACTTTCCAATGGGGAATTGGTTGCTATCAAACGGGCTGGACAAGGATCTTTGCAAGGTTCTGTTGAGTTTAAAACTGAGATTGAACTTCTATCAAGGGTTCACCATAAGAACCTCGTCAGTCTTGTGGGTTTCTGTTTTGAAAAGGGTGAACAAATGCTGGTGTATGAGTATATTGCGAATGGAACTTTGATGGATAGTCTTCAAGGAAAATCTGGAATCATTGAAAGGAGCCATGTCACTACTCAAGTCAAAGGAACAATGGGATATTTGGATCCTGAATACTACATGACACAACAGCTAACTGAAAAGAGTGATGTCTATAGCTTTGGAGTATTGTTGTTGGAATTAATCACAGGAAGAAGGCCAATAGAGCAAGGAAAATTCATTGTAAGAGAGGTAGTAAGGGTAATGGATAGATCAAAAGATTTATACAACCTTCAAGAAATTCTAGACTCTACCATAATTAAAACAACCCCAAAAGGTTTAGAGAAGCTCGTGGATCTGGCATTGAGCTGTGTTAAAGAATATGCAGCTGAGAGACCTTCAATGGCTGAAGTGGTAAAAGAGATCGAGAGTATCATGGAGCTGGCTGGTTTGAACCCCACTTCTGAATCTGCTACAACGACAGAAACTTTTGAAGATGCAAGTGGCAGCCATCCTTATGGCAAGGAAGATTTTAACTACAGTGGCGTCTATCCATCAGCAAAGTTAGAACCTCAGACTTTCGATTCTTCCCCTTTGTCTCCTCCcctccttcttcctcttcctctagTGAATCTGCAATGGCCATACCCACAATCACGGCTTCAACAATTATTCGGGTCAGAAGATCAATTACCCGAACCCACTCTATCTAGTGAATCCCGACGCGGCAACTCTAGAGAACAATGGAGATTTGCGATGAAACTCTGTAGCATATGGTACTCTAAAGCCTGGGGCATTGCAATTTTTGCTGGGGCTGCCTTTTTCGGCCATTGTTGGGTCATCAAGCGAGAAAATCCCTA 2870 0.3958 MDRERKLFLLIILLFQVLLVAAQTSNIDDFKGLTGLTENWNQKPPNWVGSDPCGSNWEGIRCENSRIISIKLSSMKLSGTLSSEIQSISELEILDLSFNMGFTGRIPDEIGNLKNLNTLILVGCRFFGIIPASIGNLKQLTFLALNANQFSGEIPSTIGNLSNIQWLDLSDNQLQGSIPVSDDNGPGLDLLHTAKHFHFGNNRLSGPVPAKLFSSNMNLIHVIFDNNRLNGSIPSSLGLVTSLEVVRFDRNQMIGQVPNISTLGKLTELYLSNNNLNGSLPDLSGLSLIYVDLSNNSFNASEIPPWASTLQYMTTLNLGNTRLQGNIPVSLFSLPNLESVVLRDNQLTGDLDIGSSYSSNLQTVDVEDNQISDFSQTNSQISKAVLLFGNPICLETGARAQSYCQERQSNLSYSTSPNNCSPLLCISNKLSSPNCKCAYPYTGTLISRALSISNFANKSYYVEIEQTLMSTFRSQNLPVDSVSLSNPFKNSSTDYFQLTIYDAPEFFSPYFFIGDDYQYYAGEPSKNSTNAGVIAGAVAGVFVFLVIAVLAGIYAFRQKKRAQTAMDRNPFVNWEQNKDSGAAPQLKGARWFSFEELKKYTNNFSDANNIGSGGYGKVYRGVLSNGELVAIKRAGQGSLQGSVEFKTEIELLSRVHHKNLVSLVGFCFEKGEQMLVYEYIANGTLMDSLQGKSGIIERSHVTTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLLLELITGRRPIEQGKFIVREVVRVMDRSKDLYNLQEILDSTIIKTTPKGLEKLVDLALSCVKEYAAERPSMAEVVKEIESIMELAGLNPTSESATTTETFEDASGSHPYGKEDFNYSGVYPSAKLEPQTFDSSPLSPPLLLPLPLVNLQWPYPQSRLQQLFGSEDQLPEPTLSSESRRGNSREQWRFAMKLCSIWYSKAWGIAIFAGAAFFGHCWVIKRENP 956
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01319 956 SUPERFAMILY Protein kinase-like (PK-like) 590 828 IPR011009 -
Bva12g01319 956 PANTHER - 8 498 - -
Bva12g01319 956 PANTHER - 698 845 - -
Bva12g01319 956 Gene3D Transferase(Phosphotransferase) domain 1 680 835 - -
Bva12g01319 956 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 8 498 - -
Bva12g01319 956 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 698 845 - -
Bva12g01319 956 ProSitePatterns Protein kinases ATP-binding region signature. 610 632 IPR017441 GO:0005524
Bva12g01319 956 Gene3D Phosphorylase Kinase; domain 1 574 679 - -
Bva12g01319 956 ProSiteProfiles Protein kinase domain profile. 604 956 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g01319 956 PANTHER - 499 695 - -
Bva12g01319 956 Pfam Protein tyrosine and serine/threonine kinase 608 712 IPR001245 GO:0004672|GO:0006468
Bva12g01319 956 SUPERFAMILY L domain-like 33 379 - -
Bva12g01319 956 Gene3D Ribonuclease Inhibitor 21 183 IPR032675 -
Bva12g01319 956 Gene3D Ribonuclease Inhibitor 286 396 IPR032675 -
Bva12g01319 956 ProSiteProfiles Leucine-rich repeat profile. 265 287 IPR001611 GO:0005515
Bva12g01319 956 Gene3D Ribonuclease Inhibitor 184 285 IPR032675 -
Bva12g01319 956 Pfam Leucine rich repeat 115 174 IPR001611 GO:0005515
Bva12g01319 956 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 499 695 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01319 Bva-Chr12 11892878 11899091 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01319 8 862 Receptor kinase-like Gene Family AT5G49760 47.009 0.0 783
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Bva12g01319 PK_Tyr_Ser-Thr 4.3e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01319 - - gmx:100786172 932.169