Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01297 ATGTCCTCTCTTTCTCCCTCTTCTAGCTCCATTTGGGTATTATCTTACTCaaagcttcaatttttcaCCCGTGTCAGACGGTTCCTCCATTCCAAAGCAACCCGAAAGCGTTGTGAGATGTCTGATCAATTCTACATATCCAAAAACGCAGCGGATGATAGTCACAAAGTTGAAATAGACACAGTTCAAGTCATGGAGAAACAGAgtggtgaagaagaagaagaagagtgtGTGGTAAAAATGATTCAGAGGTCTGTGAAGAAGCTTCACTTCGGGAGCTGGGAAGAGAAGGAGATTGCAGCAGAAGAGATTGAAAGGTTAGCTAAAGATGATGTGAAGGTCAGAAAGTTTTTAACAGAGCTTGGAGTGGTGCAGGTGTTGGTTTCTATGGTGGCTTCCACGGTGGGGAGCCGGCGGCGATCAGGGCTCAAGGCTTTGATTCAGCTTGCTAATGGAACCTACACGAACAAGGCTTTGATAGTGGAGGCAGGAATATTATCCAAGCTGCCAAAGAAAATTGACCATGTAGATGAACCgacaagaaatgaaattgCAGAGTTGCTTTTGTCATTGTCATCTTTGGCAAACACCCAATTCCCACTTGCTTCATTAGACTTTCTCCCAATTCTCAAAGACATTCTTCAATCAAGCTCGAGTTTTGATGCCAAAGAATCAAGTTTGGGTGCCATATACAACCTCTCAACTGTGTTGGAGAATGCAGGGCCATTTGTTTCAAGTGGGATAGTGAATATTCTCTTGGAAGTGTCCTCAACTAAGGAGCTTTCAGAGAAAGCACTTGCCACTTTGGGGAACTTGGTGGTGACTTTGATGGGAAAAAAGGCAATAGAGAATAGCCCAATGGTGCCAGAGAACTTGATAGAGATTCTGTCATGGGAAGATCAACAAAAATGCCAAGAGTATTCAGCTTATATTTTGATGATTCTGGCTCACCAAAGCTCAtcacaaagagagaaaatggccAAGGCAGGGATTGTTGCTGTCCTTCTCGAAGTGGCCCTGTTGGGAAGCACCTTGGCTCAGAAGAGAGCACAGAAATTATTGCAGTGGTTTAAGGATGAGAGACAAGTGAGGATGGGACCACATTCTGGTCCACAAACACGAAGAGTTGCGATTGGATCACCAATAAGTCAAAGAGAGGCAAAAGAAGGGAAGAGATTGATGAAGAACTTGGTGAAACAAAGTCAAATTAGGAATATGGAAATCATAACTCAGAGAGCCAATGCAGCAGGGGAGTCTTCTAAGTTGAAGTCATTGGTTATTAGCACAAGTTCTAAGAGTTTGCCTTACTG 1310 0.4107 MSSLSPSSSSIWVLSYSKLQFFTRVRRFLHSKATRKRCEMSDQFYISKNAADDSHKVEIDTVQVMEKQSGEEEEEECVVKMIQRSVKKLHFGSWEEKEIAAEEIERLAKDDVKVRKFLTELGVVQVLVSMVASTVGSRRRSGLKALIQLANGTYTNKALIVEAGILSKLPKKIDHVDEPTRNEIAELLLSLSSLANTQFPLASLDFLPILKDILQSSSSFDAKESSLGAIYNLSTVLENAGPFVSSGIVNILLEVSSTKELSEKALATLGNLVVTLMGKKAIENSPMVPENLIEILSWEDQQKCQEYSAYILMILAHQSSSQREKMAKAGIVAVLLEVALLGSTLAQKRAQKLLQWFKDERQVRMGPHSGPQTRRVAIGSPISQREAKEGKRLMKNLVKQSQIRNMEIITQRANAAGESSKLKSLVISTSSKSLPY 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01297 436 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 72 436 - -
Bva12g01297 436 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 72 436 - -
Bva12g01297 436 Gene3D - 46 423 IPR011989 -
Bva12g01297 436 SUPERFAMILY ARM repeat 86 339 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01297 Bva-Chr12 11791579 11794544 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01297 95 383 U-box Gene Family AT1G67530 30.464 1.54e-22 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01297 - - gmx:100813828 596.275