Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01276 ATGGCAGTTGAAGCTCACCGCATCAATCTCTTCCCTTCTCAGTTACTCACCAACAGAGAAATTATCAAATCCACCAATTGGTTAAACACAGATTTATACAATGCCCAGATGGATTCTGCTTTGCCTCTGCCAACAACAAGAACAACATTGCCCGaatctcattttcctttttaccaATCCAGTTTTTGCGATGCAAAAGCTTCAATGAACAAAGCTGATAGTGGCCTCACCTACCATCTCCCCGCACCGAGAAAGCGTTCCAGAGATTTAACCACTGAATTAAACGCTCTCCCCGTTCCCCAGAGGAGCAAAATCTCATCTCAATCGTCGTTTCTCGATCAAGAGATTATCTATCAAATCCAGCAACAAGAAACAGAGATCGACCGGTTCATTGCTCAACATACTGAGGAAGTGAGAATGGAGTTAGAGGAGCAAAGAATGCTGCAATCGAGAACGTTACTATCTGCAATTCAAGACACAATGGTGAAGAAACTGAGGGAAAAAGACGAAGAAATTCAGAGAATGGGGAAGCTGAATTGGGTTCTTCAAGAAAGGGTCAAGTCTTTATGCGTCGAGAATCAAATTTGGAGGGAATTGGCACAAACAAACGAAGCCACAGCTAATTCACTGCGTAGCAATTTGGAGCAAGTGCTCGCGCACGTTAGTACTGACGACTACCGCGACGTGGCCGCCGGTGGAGCAGCAGTGGCAAACCCAGTTGCCGACGATGCTCAGTCGAGCTGCGGAAGCAACAGCGACGAAGGCGATGATAGGAATGACACGGCGGCGACGGCAGCCGTCTGCGGCAGCGAGAGTGGCAGTGGAAGGATGTGTAAAAATTGTGGGGTGAGAGAATCGATAGTGCTGTTGCTGCCATGTAGGCATCTATGCCTGTGCACGATGTGTGGGTCCACAATCCGTAGTTGCCCAGTATGTCATTCTGGCACAAATGCTAGCGTGCATGTTAATTTCTCCTA 977 0.4678 MAVEAHRINLFPSQLLTNREIIKSTNWLNTDLYNAQMDSALPLPTTRTTLPESHFPFYQSSFCDAKASMNKADSGLTYHLPAPRKRSRDLTTELNALPVPQRSKISSQSSFLDQEIIYQIQQQETEIDRFIAQHTEEVRMELEEQRMLQSRTLLSAIQDTMVKKLREKDEEIQRMGKLNWVLQERVKSLCVENQIWRELAQTNEATANSLRSNLEQVLAHVSTDDYRDVAAGGAAVANPVADDAQSSCGSNSDEGDDRNDTAATAAVCGSESGSGRMCKNCGVRESIVLLLPCRHLCLCTMCGSTIRSCPVCHSGTNASVHVNFS 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01276 325 Pfam Zinc finger, C3HC4 type (RING finger) 276 314 - -
Bva12g01276 325 ProSiteProfiles Zinc finger RING-type profile. 278 313 IPR001841 -
Bva12g01276 325 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 255 324 IPR013083 -
Bva12g01276 325 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 324 - -
Bva12g01276 325 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 1 324 IPR017066 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01276 Bva-Chr12 11696030 11697634 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01276 261 312 C3H Transcription Factor Family AT3G06140 41.071 2.04e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01276 K19042 - gmx:100797512 412.92