Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01262 ATGCTGGTTCTATGGTCCTTAAAGCTTCAACCTTgcccaaaaatttcaaaaccctTCATTGTTGCTCTTCTTGGACCTGCTTTGTTCCATACCATAGGCCACATCTCAGCTTGTGTTTCATTCTCTAAGGTGGCTGTTTCCTTCACCCATGTCATCAAATCTGCAGAACCTGTTTTCTCTGTCATATCCTCTTCGTTCCTTGTTGAAGGGTCTCAATGGATTCCTGGTTACTACAAAGCAATTGAAGTTATAGGCAAACCATCCACATTTTATATATGGGTTTTGCTGTCTGGGGTTTTCTACCATCTCTATAACCAATCATCTTACCAAGCACTGGATGATATTAGCCCTTTGACTTTTTCAGTGGGAAACACAACGAAGAGAGTGGTGGTGATTGTATCTTCAGTCATCGTGTTCAGGAATCCAGTTAGACTTCTTAATGCTATTGGTTCTGCCATTGCAATTCTTGGGACATTCCTGTATTCGCAGACGACAGcaaaggaaacaaagaaaattgaagGCcaaatttttactattttcagCGGAATCAGCTgtaaattcttcattttaagcTTTCTTGGACATGGTGGTGAAGGGCTTTGGCGCATTATGTTAGCTGCTTCTAATTTTCCGGAGTA 638 0.3699 MLVLWSLKLQPCPKISKPFIVALLGPALFHTIGHISACVSFSKVAVSFTHVIKSAEPVFSVISSSFLVEGSQWIPGYYKAIEVIGKPSTFYIWVLLSGVFYHLYNQSSYQALDDISPLTFSVGNTTKRVVVIVSSVIVFRNPVRLLNAIGSAIAILGTFLYSQTTAKETKKIEGQIFTIFSGISCKFFILSFLGHGGEGLWRIMLAASNFPE 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01262 212 PANTHER SOLUTE CARRIER FAMILY 35 65 171 - -
Bva12g01262 212 Pfam Triose-phosphate Transporter family 67 162 IPR004853 -
Bva12g01262 212 PANTHER XYLULOSE 5-PHOSPHATE/PHOSPHATE TRANSLOCATOR, CHLOROPLASTIC 65 171 - -
Bva12g01262 212 SUPERFAMILY Multidrug resistance efflux transporter EmrE 87 163 - -
Bva12g01262 212 PANTHER SOLUTE CARRIER FAMILY 35 1 67 - -
Bva12g01262 212 PANTHER XYLULOSE 5-PHOSPHATE/PHOSPHATE TRANSLOCATOR, CHLOROPLASTIC 1 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01262 Bva-Chr12 11641432 11642910 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01262 1 69 Antiporters AT5G17630 89.855 4.62e-34 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01262 K15283 - pvy:116125760 183.726