Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01258 ATGGGGAGGAGAATCCTGAACGACGCATTGAGAAGTATAGTGAATGCCGAGAAGAGGGGAAAAGCTTCGGTGGAGTTGAAGCCCATCTCCACTGTCATCTCTTCCTTTCTCAAGGTCATGAAAGAACGAGGCTATATTAAGAACTTCGAAGTCTTTGATCCGCATAGAGTGGGGAGTATAAAAGTTGAACTACAAGGCAGGATTAAAGATGCCAAGGCCCTAACATACCGACAGGACATCAAGGCAAGGGATGTAGAAAACTACAGATTGCGAACTCTTCCAACACATCAGTGGGGTTACGTTGTGATAACAACTCCTGAGGGCATTTTGGATCATGAAGAGGCCCAAAAACGAAATGTAGGTGGTCAGGTTCTGGGTTACTTTCACTA 389 0.4524 MGRRILNDALRSIVNAEKRGKASVELKPISTVISSFLKVMKERGYIKNFEVFDPHRVGSIKVELQGRIKDAKALTYRQDIKARDVENYRLRTLPTHQWGYVVITTPEGILDHEEAQKRNVGGQVLGYFH 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01258 129 Gene3D - 2 68 - -
Bva12g01258 129 PANTHER 40S RIBOSOMAL PROTEIN S15A 1 129 IPR000630 GO:0003735|GO:0005840|GO:0006412
Bva12g01258 129 Pfam Ribosomal protein S8 6 127 IPR000630 GO:0003735|GO:0005840|GO:0006412
Bva12g01258 129 Gene3D - 70 129 - -
Bva12g01258 129 SUPERFAMILY Ribosomal protein S8 3 129 IPR035987 GO:0003735|GO:0005840|GO:0006412
Bva12g01258 129 PANTHER 40S RIBOSOMAL PROTEIN S15A-2 1 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01258 Bva-Chr12 11635996 11637535 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01258 1 129 Cytoplasmic Ribosomal Protein Gene Family AT4G29430 79.070 9.94e-78 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01258 K02957 - qsu:112040839 231.491