Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01255 ATGAAGGAGGGTGGTTGTGGGAGGAAGCAGGGTGCAGCCGCACCCTGTGCTGCATGTAAGCTTCTTAGGAGAAGATGTGCTCAGGACTGTGTTTTTGCTCCCTATTTCCCCGCAGATGAGCCCCAGAAGTTTGCCAATGTTCACAAAGTGTTTGGTGCCAGCAATGTCAACAAGATGCTTCAGGAGATACCGGAGCATCAACGAGGAGATGCAGTGAGCAGCATGGTTTACGAGGCTAATGCAAGAGTGAGAGACCCGGTGTATGGGTGTGTAGGGGCCATCTCTTCTCTTCAGCAACAGATTGATGTGCTGCAGACACAATTGGCCCTTGCCCAAGCCGAGGTGGTGCACCTTAGGGTTCGTCAGACCACATGTCTAACGAACCATGGGCCTAGCCCAACTAATAGTGGGTCACCATCATCCAAGCTCATGGATTCACAACCCAAGCATGTTTTCGACATGGACATGGACATGGTGGAACATGCTAGCTTCGGTGATTCAATGTGGTGCTA 512 0.5137 MKEGGCGRKQGAAAPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQEIPEHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLALAQAEVVHLRVRQTTCLTNHGPSPTNSGSPSSKLMDSQPKHVFDMDMDMVEHASFGDSMWC 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01255 170 PANTHER LOB DOMAIN-CONTAINING PROTEIN 3 6 157 - -
Bva12g01255 170 MobiDBLite consensus disorder prediction 126 147 - -
Bva12g01255 170 Pfam Lateral organ boundaries (LOB) domain 15 112 IPR004883 -
Bva12g01255 170 Coils Coil 94 114 - -
Bva12g01255 170 MobiDBLite consensus disorder prediction 126 145 - -
Bva12g01255 170 ProSiteProfiles LOB domain profile. 14 115 IPR004883 -
Bva12g01255 170 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 6 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01255 Bva-Chr12 11625176 11627225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01255 1 169 AS2 family AT1G31320 77.907 1.20e-77 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Bva12g01255 LOB 6e-44 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01255 - - pop:7477807 276.944