Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bva12g01244 | ATGTTGGGTGGGCTATATGGAGACCTCCCTCCACCTTCTTCTgctgaagaagagaaaaccaGCAACACCAATGTATGGTCAAGCAGCATGAAGATGGCTCCGGCCACTCTGCGAAAGCCGGCGTCAGTTTTTGCACCTCCACAAACGGTTCTGCGATCTCAAAGCAAACCCAAAGCTGTGAATTCTTCTGTCTCCAAAACAGTAACATCAACGCCGGTTGCAGTAGCACCGTCGCCGGTGGGAGCTGATGATGTGGCGCAACCGCACCCAGCTCTTGTGGGTGTCCAATCGACGGTGATAGAGGAGTATGACCCGGCTAGGCCGAATGACTATGAAGAATATAGGagggagaagaagaggaaggcCAGGGAGGCAGAGATGATGAAAGAGCTTGAAAAGAGACggcaagaggaagaagagagggagagaaggGAGAGAGAAGAGCGAGAGAGGGAAAGAGATAGGGAAGGGGAATATGGGGATTCAGGATTGAATATATCAGGTGAGGAGGCATGGAGAAGGCGTGCAGCAATGAGTGGAGCAGCTCCACGGTCGCCGTCTCCTCCAAGTACTGGAGACGGTTTTACCATTGGGAAGTCAGAAACTGGTGGATTGGGCCTGGGTGCTGGTGGGCAAATGACTGCAGCTCAGAGAATGATGGCTAAGATGGGATGGAAACAAGGGCAAGGGCTTGGGAAGCAGGAGCAAGGAATTACTACTCCTTTGATGGCCAGGAAAACAGATAGAAGAGCTGGAGTTATAGTGAATGCTAGTGATAACAAGCCCGAGAAGAAAGTGAAGAGTGTAAACTTCAATGGACCGCCTACACGGGTGCTATTGCTTAGAAACATGGTGGGCCCTGGCGAAGTTGATGATGAATTGGAAGAGGAGGTAGGATCAGAATGTGGCAAGTATGGAACAGTGACCAGGGTTCTTATATTTGAGATAACAGAGCCAAATTTCCCTTCAGATGAAGCAGTAAGAATCTTTGTCCAGTTTGAAAGATCTGAAGAAACAACTAAATCTATTATCGATCTTGATGGTCGATATTTTGGAGGTAGAGTGGTGCGTGCCACATTTTACGACGAGGAGAGATTTGGCCGGAATGAGTTAGCTCCAATGCCTGGAGAAATTCCCGGCTTCTTTTG | 1148 | 0.4608 | MLGGLYGDLPPPSSAEEEKTSNTNVWSSSMKMAPATLRKPASVFAPPQTVLRSQSKPKAVNSSVSKTVTSTPVAVAPSPVGADDVAQPHPALVGVQSTVIEEYDPARPNDYEEYRREKKRKAREAEMMKELEKRRQEEEERERREREERERERDREGEYGDSGLNISGEEAWRRRAAMSGAAPRSPSPPSTGDGFTIGKSETGGLGLGAGGQMTAAQRMMAKMGWKQGQGLGKQEQGITTPLMARKTDRRAGVIVNASDNKPEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDELEEEVGSECGKYGTVTRVLIFEITEPNFPSDEAVRIFVQFERSEETTKSIIDLDGRYFGGRVVRATFYDEERFGRNELAPMPGEIPGFF | 382 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bva12g01244 | 382 | MobiDBLite | consensus disorder prediction | 46 | 211 | - | - | |
Bva12g01244 | 382 | PANTHER | SPLICING FACTOR 45 SPF45 | 1 | 373 | IPR040052 | GO:0045292 | |
Bva12g01244 | 382 | CDD | RRM_UHM_SPF45 | 275 | 371 | IPR034653 | - | |
Bva12g01244 | 382 | Gene3D | - | 276 | 362 | IPR012677 | - | |
Bva12g01244 | 382 | SMART | rrm2_1 | 278 | 359 | IPR003954 | GO:0003676 | |
Bva12g01244 | 382 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 277 | 363 | IPR000504 | GO:0003723 | |
Bva12g01244 | 382 | SUPERFAMILY | RNA-binding domain, RBD | 280 | 365 | IPR035979 | GO:0003676 | |
Bva12g01244 | 382 | Pfam | G-patch domain | 215 | 254 | IPR000467 | GO:0003676 | |
Bva12g01244 | 382 | ProSiteProfiles | G-patch domain profile. | 212 | 258 | IPR000467 | GO:0003676 | |
Bva12g01244 | 382 | MobiDBLite | consensus disorder prediction | 105 | 160 | - | - | |
Bva12g01244 | 382 | Coils | Coil | 111 | 155 | - | - | |
Bva12g01244 | 382 | PIRSF | SPF45 | 3 | 378 | IPR040052 | GO:0045292 | |
Bva12g01244 | 382 | MobiDBLite | consensus disorder prediction | 1 | 27 | - | - | |
Bva12g01244 | 382 | MobiDBLite | consensus disorder prediction | 47 | 74 | - | - | |
Bva12g01244 | 382 | SMART | G-patch_5 | 210 | 256 | IPR000467 | GO:0003676 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bva12g01244 | Bva-Chr12 | 11568447 | 11571572 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bva12g01244 | 218 | 253 | C2H2 Transcription Factor Family | AT5G26610 | 61.111 | 1.01e-06 | 48.1 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bva12g01244 | K12840 | - | zju:107418861 | 478.404 |