Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01243 ATGAAGGGAACGTGTGGAGGAAGCAAGAGGAGTGAGAGTGATAAGGAGAAGACGAAACTGAGAGAAAGGCAGAGAAGGGCCATCACCGCTAACATCTTTCACGGCTTGAGAAAGCACGGAGGTTATCGTCTTTCTCCTCGTGCAGACATTAATGAAGTTCTTCGTGAGCTTGCTAAGGAAGCTGGTTGGATTGTTGAACCTGATGGCACCACCTACCGCTCAAAGGTTTTGAACTGCTGTCCTCTGTGTGGCGCCACTAAAACCAGCATCGACCCGACACCCACCAGCAGCGTCGTCAACGGTGGTGGAGGTAGCGGCGGCGGGGGTGGTGGTGAGTGCTCAACGACAGCGTTGCCTCACGGAGTCTGTGTCGGAGGCCCTCTAGCCAGTTTCAGTGGCGGGTGTTCTTCGTTGCTCTGCTTTCGCGAGGCATTCTTTGCTGGTAACACCATCTCTGTTCCTCTTTACACGTACCAAGGTCTCGCCGGTGAGATCCAATCTAGCGGCGGAGGGAACGGCGGAGCTACTGGCCTCGCAGAGTGCTCGGCGATGACTTATGAGCGACAGGGACAAGTGGCACATTTGGATGGTGTGAATTTGCAGGTGCAGCAGTCGAATCATAGTACAGTGGCAGGGTCTTCTATGGGCCGCATTTA 656 0.5442 MKGTCGGSKRSESDKEKTKLRERQRRAITANIFHGLRKHGGYRLSPRADINEVLRELAKEAGWIVEPDGTTYRSKVLNCCPLCGATKTSIDPTPTSSVVNGGGGSGGGGGGECSTTALPHGVCVGGPLASFSGGCSSLLCFREAFFAGNTISVPLYTYQGLAGEIQSSGGGNGGATGLAECSAMTYERQGQVAHLDGVNLQVQQSNHSTVAGSSMGRI 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01243 218 MobiDBLite consensus disorder prediction 7 22 - -
Bva12g01243 218 Pfam BES1/BZR1 plant transcription factor, N-terminal 7 88 IPR008540 -
Bva12g01243 218 MobiDBLite consensus disorder prediction 1 22 - -
Bva12g01243 218 PANTHER PROTEIN BZR1 HOMOLOG 3-LIKE 3 140 - -
Bva12g01243 218 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 3 140 IPR033264 GO:0003700|GO:0006351|GO:0009742
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01243 Bva-Chr12 11566565 11568242 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01243 6 75 Glycoside Hydrolase AT2G45880 65.278 3.42e-23 95.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Bva12g01243 BES1_N 1.1e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01243 - - mnt:21408688 170.244