Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01205 ATGGCAGATGAAACACAAAATGATATGAAGGAGGAAGTGCCAGAAATAGTCCCCTTTGATCCtactaagaagaagaagaaaaagaaagttactATTCAAGATGCTGCTGATGATTCAGCAGACAAGTTGGCCgagaaaacagaaaacttgtcaaTTTCTGATGGGGCTGAGACTACATTTACGggtttgaagaagaagaagaagaagcctATTGAACCCAGTAACTTGAATGATGAGACTGGAGATGCAGGTGAAGATTTTGATgATCACATCGGAGAGGAAGATGGAGAAAGTACTGTCCTGCAGCCTCATTTTCCTTGGGAGGGGAGTAATCGTGATTATGAATATGAGGagCTTCTTGGCAGGGTGTTTAACATTCTACGTGAAAATAATCCTGAACTGGCTGGAGATCGGCGGAGGACTGTCATGAGGCCTCCTCAAGTTCTTCGTGAGGGCACAAAGAAAACTGTTTTTGTCAACTTCATGGATCTTTGCAAGACGATGCATCGGCAGCCAGACCACGTCATGGCTTTCTTGCTTGCTGAACTGGGTACAAGTGGCTCGCTAGATGGACAGCAAAGATTGGTTGTGAAGGGAAGATTTGCACCAAAGAACTTTGAAGGAATTCTGCGACGATATATCAATGAATATGTCATTTGCCTTGGATGCAAGAGTCCGGACACTATACTTTCAAAGGAGAACCGTCTGTTCTTCCTCAGATGTGAGAAGTGTGGATCAGGAAGATCAGTCGCTCCAATCAAGGCTGGTTTTGTTGCTCGGATTGGCCGTAGAAATGCAGGGACATG 806 0.4082 MADETQNDMKEEVPEIVPFDPTKKKKKKKVTIQDAADDSADKLAEKTENLSISDGAETTFTGLKKKKKKPIEPSNLNDETGDAGEDFDDHIGEEDGESTVLQPHFPWEGSNRDYEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYINEYVICLGCKSPDTILSKENRLFFLRCEKCGSGRSVAPIKAGFVARIGRRNAGT 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01205 268 MobiDBLite consensus disorder prediction 60 75 - -
Bva12g01205 268 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 BETA SUBUNIT 1 268 - -
Bva12g01205 268 MobiDBLite consensus disorder prediction 79 93 - -
Bva12g01205 268 MobiDBLite consensus disorder prediction 1 106 - -
Bva12g01205 268 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 113 220 IPR016189 GO:0003743|GO:0006413
Bva12g01205 268 Gene3D - 111 253 - -
Bva12g01205 268 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 217 252 IPR016190 GO:0003743|GO:0006413
Bva12g01205 268 MobiDBLite consensus disorder prediction 30 48 - -
Bva12g01205 268 Pfam Domain found in IF2B/IF5 137 246 IPR002735 GO:0003743|GO:0006413
Bva12g01205 268 MobiDBLite consensus disorder prediction 1 22 - -
Bva12g01205 268 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 1 268 IPR045196 GO:0003743|GO:0006413
Bva12g01205 268 SMART eIF2Bneu4 138 247 IPR002735 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01205 Bva-Chr12 11361162 11365525 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01205 1 264 Eukaryotic Initiation Factors Gene Family AT5G20920 76.030 8.18e-139 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01205 K03238 - zju:107411571 471.085