Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01181 ATGTCTGCGACATCGACCTTCAATCCGACTCTTCCCGCCTCCGGCCAGCGACTCCGGTTCTCCTCCGACCACAGTTTTCCTTCTTCCGTCAGCTTCCTCCGGCAAACGTCCGAGATCCGGTGCAGAGCTTCAGTCCGCTCTTTCACGACGGAGACTGCCTCGGGGATGATGGATGCCCGCCGGAAGACTCCGGAGAGCCTCTACGAGGTGCTCCGAGTCGACCGGAACGCTTCTACAAGGGAAATCAAGTCGGCATATAGGAATCTGGCAAAGCTGTACCACCCTGATACGGCGGTGAACCGGTCTGAATCTGACGGTAGGGATTTCATTGAGATCCACAATGCCTATGCCACTCTGGCGGATCCCTCAGCGAGAGCATTGTATGATCTTTCCTTGGTGGCTCGTCAAAGGGGGCGCTCATTTTCATATGCCGTTGGCATTCAGATGAACCCGTCTTCCGGGTGTTACCCGACCCAGAGATGGGAAACGGACCAATGCTGGTA 503 0.5626 MSATSTFNPTLPASGQRLRFSSDHSFPSSVSFLRQTSEIRCRASVRSFTTETASGMMDARRKTPESLYEVLRVDRNASTREIKSAYRNLAKLYHPDTAVNRSESDGRDFIEIHNAYATLADPSARALYDLSLVARQRGRSFSYAVGIQMNPSSGCYPTQRWETDQCW 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01181 167 Pfam DnaJ domain 67 129 IPR001623 -
Bva12g01181 167 Gene3D DnaJ domain 51 146 IPR036869 -
Bva12g01181 167 CDD DnaJ 68 121 IPR001623 -
Bva12g01181 167 SMART dnaj_3 65 124 IPR001623 -
Bva12g01181 167 PRINTS DnaJ domain signature 68 86 IPR001623 -
Bva12g01181 167 PRINTS DnaJ domain signature 86 101 IPR001623 -
Bva12g01181 167 PRINTS DnaJ domain signature 104 124 IPR001623 -
Bva12g01181 167 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 19 167 - -
Bva12g01181 167 ProSitePatterns Nt-dnaJ domain signature. 109 128 IPR018253 -
Bva12g01181 167 SUPERFAMILY Chaperone J-domain 64 140 IPR036869 -
Bva12g01181 167 ProSiteProfiles dnaJ domain profile. 66 132 IPR001623 -
Bva12g01181 167 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 19 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01181 Bva-Chr12 11241364 11242166 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01181 56 129 C2H2 Transcription Factor Family AT1G74250 39.744 9.33e-08 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01181 - - csin:114314736 154.836
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01181 12 11241364 11242166 Bva12g02568 12 19120985 19121488 BWGD