Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01176 atggtgggctgttccatTTTTCAACTTCTTGTATCAGCATTTTTTCTCTGCTCTTTCTTTCAGCAACCTGCCCATGCATTAAAAAAGTCTTACATTGTATACCTGGGATCACATTCTCATGGTCAAAATCCTTCATCTGCTGATCTTGAATCTGCCACAAGTTCCCATTATAGCTTATTGGGCTCACTCTTGGGAAGCCATGAGAAGGCCAAAGAAGCAATCTTCTACAGCTACAATAGGCACATTAATGGCTTTGCTGCTGTacttgaagaggaagaagcagCAGAGTTAGCAAAAAACCCAAATGTAATATCTGTATTCTTGAACGAGGTAAAGAAATTGCACACTACCCATTCATGGCAATTTCTTGGCCTAGAGAAAAATGGAACAATTCCTAAAGACTCCATTTGGGAAAAGGCGAGATACGGTGAAGATACAATTATTGGTACCCTTGATACAGGTGTTTGGCCTGAATCCAAGAGCTTTAGTGATGAAGGTTATGGCCCAGTCCCCTCAAGGTGGCGAGGTCACGGTGTCTGTCAATTTGGAACTAATAATTCACATAAAGTTCTCTGCAACAGGAAGCTGATTGAAGCTCAATTCTTCATTAAAGGTTATGAGGCTGCTGCTTGGGGTAAAGTTAATGCATCACTTTATACCACTCGTGACACAGAAGGCCATGGTACCCACACTCTCACAACTGCTGGGGGAAATTTTGTTCCAGGAGCAAGTGTTTCCGGTTATGGAAGTGGCACAGCCAAAGGTGGATCCCCGAAGGCCAGAGTTGCAGCCTACAAAGTTTGCTGGCCTCCAATTAACACCACAGCTGGTGGTGGCTGCTATGATGCAGATATCTTAGCTGGTTTTGAGGCTGCCATAAACGACCGTGTTGATGTAATTTCAGCTTCCATTGGTGGACCTCCCACATATATGTATCAAGATCCAATTGCCATAGGGTCCTTCCATGCAGTTGCCAATGGCATAGTGGTAGTTGCCTCGGCAGGGAATGAAGGACCAGACCTTGGTACAGTATCCAATATAGCACCATGGATTTTCACAGTTGCTGCTAGTACAACAGACAGGGATTTCCGCAGCTATGTTTCACTTGGAGATAAGAAACATATAAAGGGATCTAGTCTTTCAGCCAAAGgcttgaagaaattttatccTTTGATTTCTGCTGAGGATGCCAAACTGCCTAATGTGCAACCTGATCAAGCCAAAATATGCTTAAATGGAACCCTTGATCCTAACAAAGTGAAGGGAAAAATACTGGTCTGCCTTCGCGGTGAGACTAACAGAATTGATAAAGGCATACAAGCTTCTCGAGGTGGTGCAGTGGCAATGATTCTGGCAAATGATGTCAGTAATGGAGATGACACTGAAGCCGATCCCCATGTTTTACCTGCTGCACATGTCACTTGCAAAGATGGAGAATATGTTTATTCCTACATAAATAGGACCAAGAACCCTGGGTCTTACATGACTAAACCAAGAACAGAACTGGGCATAAAGCCAGCCCCATCCATGGCTGTATTCTCATCTAGAGGACCTAATACCATTATTCCAACAATCCTTAAGCCTGACATCACTGCTCCCGGGGTGAACATTATTGCTTCTTACTCAGAAGCTGCAAGTCCAACTGATCCAACTCCTAGTAAATATCGAATTCCTTTTGATATATTGTCAGGAACATCTATGTCTTGCCCTCACGTCTCTGGCATCGTTGGTCTTCTCAAAACATTCCACCCCGATTGGAGTCCGGCCGCGATTAGATCAGCAATCATGACCACTGCTACCACTCTAGATAACAGTAATGGGAAAATTGAAGACTCAGACCTTGCACATCAAGCAACTCCATGGCATTATGGCGCTGGACATGTTCAACCTGATCTTGCTTTAGACCCTGGCCTTGTTTATGAACTAAACACTTTTGATTACCTAAACTTCTTATGTGCTTCTGGTTACAATAAATCAGGTTTACTCAAGTTGTTCTATGACAAGCCTTTCACTTGTCCCAAGTCATACAATGTAGCAGATTTCAACTATCCTTCAATCGCAGTGAGGCTTGGGCTGAACCCTGTGAATATATCTCGTACAGTCACAAACGTTGGACCTCCGAGCACATACTATGTAGTTGCCAGAGCGCCTGAAGGGCTTCAGATTTTTGTTCAGCCAAATTACCTGAGATTTGAGAAAACTGGAGAGAAGAAGACTTTCCATGTTCTTTTTCAACCAGCTGGTTGGCCTAAGCATCAAGACACTCTATTTGGGGAGTTGTGGTGGACAGATGGCAAACACAGAGTCAGGAGTCCTATTACAGTTACTCGAATCAAGTTTTG 2342 0.4257 MVGCSIFQLLVSAFFLCSFFQQPAHALKKSYIVYLGSHSHGQNPSSADLESATSSHYSLLGSLLGSHEKAKEAIFYSYNRHINGFAAVLEEEEAAELAKNPNVISVFLNEVKKLHTTHSWQFLGLEKNGTIPKDSIWEKARYGEDTIIGTLDTGVWPESKSFSDEGYGPVPSRWRGHGVCQFGTNNSHKVLCNRKLIEAQFFIKGYEAAAWGKVNASLYTTRDTEGHGTHTLTTAGGNFVPGASVSGYGSGTAKGGSPKARVAAYKVCWPPINTTAGGGCYDADILAGFEAAINDRVDVISASIGGPPTYMYQDPIAIGSFHAVANGIVVVASAGNEGPDLGTVSNIAPWIFTVAASTTDRDFRSYVSLGDKKHIKGSSLSAKGLKKFYPLISAEDAKLPNVQPDQAKICLNGTLDPNKVKGKILVCLRGETNRIDKGIQASRGGAVAMILANDVSNGDDTEADPHVLPAAHVTCKDGEYVYSYINRTKNPGSYMTKPRTELGIKPAPSMAVFSSRGPNTIIPTILKPDITAPGVNIIASYSEAASPTDPTPSKYRIPFDILSGTSMSCPHVSGIVGLLKTFHPDWSPAAIRSAIMTTATTLDNSNGKIEDSDLAHQATPWHYGAGHVQPDLALDPGLVYELNTFDYLNFLCASGYNKSGLLKLFYDKPFTCPKSYNVADFNYPSIAVRLGLNPVNISRTVTNVGPPSTYYVVARAPEGLQIFVQPNYLRFEKTGEKKTFHVLFQPAGWPKHQDTLFGELWWTDGKHRVRSPITVTRIKF 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01176 780 Pfam PA domain 410 479 IPR003137 -
Bva12g01176 780 PRINTS Subtilisin serine protease family (S8) signature 563 579 IPR015500 -
Bva12g01176 780 PRINTS Subtilisin serine protease family (S8) signature 143 162 IPR015500 -
Bva12g01176 780 PRINTS Subtilisin serine protease family (S8) signature 223 236 IPR015500 -
Bva12g01176 780 SUPERFAMILY PA domain 417 487 IPR046450 -
Bva12g01176 780 ProSiteProfiles Serine proteases, subtilase domain profile. 119 634 - -
Bva12g01176 780 Pfam Subtilase family 143 604 IPR000209 GO:0006508|GO:0008236
Bva12g01176 780 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 23 775 - -
Bva12g01176 780 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 23 775 IPR045051 -
Bva12g01176 780 CDD PA_subtilisin_like 366 491 - -
Bva12g01176 780 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 115 IPR037045 -
Bva12g01176 780 SUPERFAMILY Subtilisin-like 114 638 IPR036852 GO:0004252|GO:0006508
Bva12g01176 780 Pfam Fibronectin type-III domain 680 775 IPR041469 -
Bva12g01176 780 ProSitePatterns Serine proteases, subtilase family, serine active site. 564 574 IPR023828 -
Bva12g01176 780 Gene3D - 360 502 - -
Bva12g01176 780 CDD Peptidases_S8_3 112 600 IPR034197 -
Bva12g01176 780 Gene3D Peptidase S8/S53 domain 145 647 IPR036852 GO:0004252|GO:0006508
Bva12g01176 780 Pfam Peptidase inhibitor I9 30 115 IPR010259 -
Bva12g01176 780 Gene3D - 651 778 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01176 Bva-Chr12 11215569 11219159 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01176 18 775 Subtilisin-like Serine Gene Family AT5G59810 57.627 0.0 848
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01176 - - vvi:100251507 911.368