Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01175 ATGCGTTCCTCCATTATCCATCTTCTTGTATCATCACTTCTTTGCTCTATTTTGCAGGAACCCGCGCATGCCATCAAGCAGTCTTACATCGTATACTTAGGAGCGCATTCTCATGGCCTAGATCCTTTGGCTACTGATCTCCAGTCTGCAACAAATTCCCATTATAATTTACTAGTCGCACATATTGGAAgCCATGAGAAGGCCAAAGAAGCTATCTTTTACTCGTATAATAGACACATCAATGGCTTTGCTGCAGTacttgaagaggaagaagcagCAGAGATTGCGAAAAACCCGAATGTAGTGTCTGTGTTCTTGAACAAAGGGCATGAACTACACACTACCCGGACGTGGGAATTTCTCGGACTAGAGAGAAATGGAATAGTTCCTACACACTCGGTCTGGAATAAGGGAAGATACGGTGAAGATACAATCATTGCTAACCTTGATACTgGTGTTTGGCCTGAATCCAAGAGCTTTAGTGGGGAAGGAATGGGTCCTATCCCATCAAAGTGGCGGGGAATCTGCCAATTTGAAGATTTTCATTGCAACAGGAAGTTGATAGGAGCAAGATTCTTCAGCAAAGGCTACGAGGCAAGTTTTGGCAAGCTAAACGAATCGTTTTATACAGCACGCGACTACAATGGCCATGGCACGTTTACTCTGTCAACAGCTGGGGGCAATTTTGTCCAAGGGGCTAGTGTTTTTGGTCATGGCAATGGCACTGCCAAGGGTGGATCCCCCAGAGCCCGTGTTGCAGCCTACAAGGTCTGCTGGCCTCTAGTCAATCTCCTCCAATGCACTGATGCAGATGTCATGGCTGCTTTTGATGCTGCTATAAGTGATGGTGTTgatattatttcattctctttgGGTAAAGCTGTCACAACATTATTTGAAGATGGGTTTTCCATAGGGGCCTTCCATGCAATTTCCAATGGCATATTGGTAGTCAGCGCTGGAGGGAATTCAGGACCAAAACCTGGAACTGTAATTAATGTGGCACCATGGATGTTCACTGCGGGTGCCAGCACAATAGACAGAGACTTTGCTAGTTATGTTGCACTTGGTAACAAGAAGCACCTAAAGGGAGCTAGTGTTTCTACAGGCTTGCCATCTGAGAAATTCTACCCTTTGATTAGTGCTGTAGATGTTAAAGCTGCTAATGTGACCATAGAAGATGCCCAAGTCTGCAAAAATGGGAGCCTCGACCCTAAGAAGGTGAAGGGTAAAATCCTTGTCTGCCTTCTAAACATTACTGCAATAGCTCACGTTGGGCAAGAAGCTTCTCTTGCAGGCGCAGTAGGGATGGTTTTGGTTGATAATGATCAGCAGTATCATTTTGGCATCATGCCTTATCCACATATTTTGCCTACTTCACACATCAATTCTGCAGATGGTGAATATGTTTACTCCTACATCAAAAGCACCAAGACTCCTATGGCTTACATGACAAGAGCAAAAACGGAACTAGGAATAAAACCAGCTCCTGTAATGGCTTCGTTCTCATCTAGGGGGCCTAATATCATCTTACCTTCAATTCTCAAGCCTGATATCATTGCACCTGGCGTAGACATTATAGCTGCATACTCAGAAGCCACAAGTCCAACTGGTCTAATATCAGATAAACGTAGAATTCCTTTTATGGTAGGGTCTGGAACTTCTGCTTCTACTCCTCATGTTGCCGGCATCGCTGCCCTTCTCAAAACAGTCTATCCCCATTGGAGTCCTGCAGCTATCAAGTCTGCAATCATGACCACTGCAACGACAGTAGATGCAAGCAACAGACCAATTTTGAACTCATCTAAGCAAGAACCAGCAACTCCATTTGCTTATGGTGCAGGACACATTGAACCTCACCTTGCAATGGACCCTGGACTGGTTTATGACTTGAACACTGCTGATTACTTGAACTTCTTGTGTGCTCATGGCTACAACCGAACACAGATTCTGTTGTTCTCTAAAAGGCCTCACACTTGTCCAAAGTCATATCATGCAGCAGATTTCAACTACCCTTCAATCACTGTGCCAAATCTTGGGAAACACACTGTAAATGTCACTCGTATAGTCACAAACGTTGGATCTCCGAACACATATAATGTGCATGTCAAGGCACCTAAGGGGGTTTCGGTTTTGGTTGAGCCAAGTTCCTTGACGTTTAAGAAAGTaggtgaaaagaagaaatttaatgtTGTTTTGAAGGGCATTGGTCTAAGTAAGTCAGCAGGTTATGTATTTGGAGAGTTGTGTTGGTACGATGGTAGGCACAGTGTCAAGAGTCCTATTACAGTGAAGGgata 2300 0.4317 MRSSIIHLLVSSLLCSILQEPAHAIKQSYIVYLGAHSHGLDPLATDLQSATNSHYNLLVAHIGSHEKAKEAIFYSYNRHINGFAAVLEEEEAAEIAKNPNVVSVFLNKGHELHTTRTWEFLGLERNGIVPTHSVWNKGRYGEDTIIANLDTGVWPESKSFSGEGMGPIPSKWRGICQFEDFHCNRKLIGARFFSKGYEASFGKLNESFYTARDYNGHGTFTLSTAGGNFVQGASVFGHGNGTAKGGSPRARVAAYKVCWPLVNLLQCTDADVMAAFDAAISDGVDIISFSLGKAVTTLFEDGFSIGAFHAISNGILVVSAGGNSGPKPGTVINVAPWMFTAGASTIDRDFASYVALGNKKHLKGASVSTGLPSEKFYPLISAVDVKAANVTIEDAQVCKNGSLDPKKVKGKILVCLLNITAIAHVGQEASLAGAVGMVLVDNDQQYHFGIMPYPHILPTSHINSADGEYVYSYIKSTKTPMAYMTRAKTELGIKPAPVMASFSSRGPNIILPSILKPDIIAPGVDIIAAYSEATSPTGLISDKRRIPFMVGSGTSASTPHVAGIAALLKTVYPHWSPAAIKSAIMTTATTVDASNRPILNSSKQEPATPFAYGAGHIEPHLAMDPGLVYDLNTADYLNFLCAHGYNRTQILLFSKRPHTCPKSYHAADFNYPSITVPNLGKHTVNVTRIVTNVGSPNTYNVHVKAPKGVSVLVEPSSLTFKKVGEKKKFNVVLKGIGLSKSAGYVFGELCWYDGRHSVKSPITVKG 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01175 766 ProSiteProfiles Serine proteases, subtilase domain profile. 117 623 - -
Bva12g01175 766 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 21 764 IPR045051 -
Bva12g01175 766 Pfam Peptidase inhibitor I9 28 112 IPR010259 -
Bva12g01175 766 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 14 113 IPR037045 -
Bva12g01175 766 Pfam PA domain 397 468 IPR003137 -
Bva12g01175 766 Gene3D - 347 491 - -
Bva12g01175 766 CDD PA_subtilisin_like 353 482 - -
Bva12g01175 766 Gene3D - 640 766 - -
Bva12g01175 766 PRINTS Subtilisin serine protease family (S8) signature 213 226 IPR015500 -
Bva12g01175 766 PRINTS Subtilisin serine protease family (S8) signature 552 568 IPR015500 -
Bva12g01175 766 PRINTS Subtilisin serine protease family (S8) signature 141 160 IPR015500 -
Bva12g01175 766 Pfam Subtilase family 141 615 IPR000209 GO:0006508|GO:0008236
Bva12g01175 766 Gene3D Peptidase S8/S53 domain 143 636 IPR036852 GO:0004252|GO:0006508
Bva12g01175 766 ProSitePatterns Serine proteases, subtilase family, serine active site. 553 563 IPR023828 -
Bva12g01175 766 CDD Peptidases_S8_3 110 589 IPR034197 -
Bva12g01175 766 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 21 764 - -
Bva12g01175 766 SUPERFAMILY Subtilisin-like 112 627 IPR036852 GO:0004252|GO:0006508
Bva12g01175 766 Pfam Fibronectin type-III domain 668 764 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01175 Bva-Chr12 11210748 11214512 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01175 28 765 Subtilisin-like Serine Gene Family AT2G04160 57.930 0.0 855
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01175 - - qsu:112012946 997.267