Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01174 ATGAGCGATTCTGCTTACAGAGTCGAAACCACTTCTCGTCTCGCACAATGGAGAATCGAAAACTTAGCTTCCTGCACTTACCGCAAATCCGATCCTTTCAAGATGGGCAAGTGGAATTGgCATTTGTCCGTAGAGAAGAGCCgggttttgtttattaaattataccCAGAAATATCCAATCTAACAAGGGATAATCCTCCAATTGCATCTTTCATCATTCGCGTGGTTAGTTCTGCAGGAGATCGCAAAGCCTTGACTCATCCAGAAATTAGAGACAAGCAGCTCAAGAATAACGAAGACTTTGTTTGGGCAATTGATGTTCCACTAACTGGGAAATTCATCATTGACATTGAGTTCCTTGATTTGAAGACAGCATCCCCAAACGGTGGAGAACCGTGCTCCATCTGGGCTGAGGGATTTACGCAGCAAAGATCAAATGTTTCAGCTCTTGAAGCTCTTGGTCGAATGCTAACAGAAGGAATCCACACAGACATAATGATAAATGCTTCAGATGGAAGCATTGGGGCTCATCGCGCTGTTCTTGCTGCTCGATCACCTGTCTTCCGCAGCATGTTCTCCCATGATCTTAAGGAGAAAGAGTTATCAACCATAGACATCTCAGACATGTCAATTGAGGCTTGCCAGGCTTTCCTCAATTATCTTTATGGGAACATCAAACACGAAGACTTTCTCACACACAGGTTGGCCCTTATACGCGCAGCTGACAAGTATGACGTATCCGACTTGAAAGATGCATGCCATGATAGTCTTCTTGAAGATATTGATGCTAAGAATGTCCTTGAGAGGCTCCAAAATGCAACTCTGTATCAATTGCCAAAACTGAAGATTAGCTGTCTGCGATATCTTGTCAAATTTGGTAAAATATTTGACATTCGAGATGATCTCAGTGCCTTCTTGCAATGTGCAGACAGGGAACTTATAGCTGAAGTGTTCAATGAAGTTCTAAATGCTTGGAAAGGATTCTG 986 0.4209 MSDSAYRVETTSRLAQWRIENLASCTYRKSDPFKMGKWNWHLSVEKSRVLFIKLYPEISNLTRDNPPIASFIIRVVSSAGDRKALTHPEIRDKQLKNNEDFVWAIDVPLTGKFIIDIEFLDLKTASPNGGEPCSIWAEGFTQQRSNVSALEALGRMLTEGIHTDIMINASDGSIGAHRAVLAARSPVFRSMFSHDLKEKELSTIDISDMSIEACQAFLNYLYGNIKHEDFLTHRLALIRAADKYDVSDLKDACHDSLLEDIDAKNVLERLQNATLYQLPKLKISCLRYLVKFGKIFDIRDDLSAFLQCADRELIAEVFNEVLNAWKGF 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01174 328 Gene3D Potassium Channel Kv1.1; Chain A 139 291 IPR011333 -
Bva12g01174 328 SUPERFAMILY POZ domain 148 259 IPR011333 -
Bva12g01174 328 PANTHER OS08G0495500 PROTEIN 1 328 - -
Bva12g01174 328 SMART BTB_4 163 261 IPR000210 GO:0005515
Bva12g01174 328 CDD BTB_POZ_ZBTB_KLHL-like 162 244 - -
Bva12g01174 328 ProSiteProfiles BTB domain profile. 163 222 IPR000210 GO:0005515
Bva12g01174 328 PANTHER OS08G0495500 PROTEIN-RELATED 1 328 IPR044714 -
Bva12g01174 328 Pfam BTB/POZ domain 156 259 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01174 Bva-Chr12 11206420 11208803 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Bva12g01174 BTB 1.5e-21 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01174 K10523 - gmx:100790186 589.726